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B8DGP0 (B8DGP0_LISMH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Hydrolase, TatD family EMBL ACK40793.1
Gene names
Ordered Locus Names:LMHCC_2458
OrganismListeria monocytogenes serotype 4a (strain HCC23) [Complete proteome] [HAMAP] EMBL ACK40793.1
Taxonomic identifier552536 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length257 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ACK40793.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionendodeoxyribonuclease activity, producing 5'-phosphomonoesters

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8DGP0 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: B55E50C0C32F820F

FASTA25729,312
        10         20         30         40         50         60 
MLFDTHVHLN DEAFDDDIEE VIKRAQENDV TRMAVVGFNK ETIDRALELA EKYDFISLIV 

        70         80         90        100        110        120 
GWHPTDAITF TDADLEWLRD LALTHPKVVA LGEMGLDYHW DTSPKETQFE VFRKQIRLAK 

       130        140        150        160        170        180 
EVNLPIVIHN REATEDVVRI LQEEHAEEVG GIMHCFGETV EVMEACLAMN FYISFGGTVT 

       190        200        210        220        230        240 
FKNAKLPKIA AQAIPIDRLL IETDAPYLAP TPNRGKRNEP GYVKLVAEKI AELKEMKYSE 

       250 
IATHSTENAK RLFKIKD

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References

[1]"Genome sequence of lineage III Listeria monocytogenes strain HCC23."
Steele C.L., Donaldson J.R., Paul D., Banes M.M., Arick T., Bridges S.M., Lawrence M.L.
J. Bacteriol. 193:3679-3680(2011) [PubMed: 21602330] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HCC23.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001175 Genomic DNA. Translation: ACK40793.1.
RefSeqYP_002351407.1. NC_011660.1.

3D structure databases

ProteinModelPortalB8DGP0.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8DGP0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7079224.
GenomeReviewsGene locus LMHCC_2458 in contig CP001175_GR.
KEGGlmh:LMHCC_2458.
PATRIC20320061. VBILisMon86872_2440.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG629833.
OMALPLVIHT.
ProtClustDBCLSK872601.

Family and domain databases

InterProIPR012278. DNase_TatD.
IPR018228. DNase_TatD-rel_CS.
IPR015991. DNase_TatD_bac-type.
IPR001130. TatD_superfamily.
[Graphical view]
KOK03424.
PANTHERPTHR10060. TatD_DNase. 1 hit.
PfamPF01026. TatD_DNase. 1 hit.
[Graphical view]
PIRSFPIRSF005902. DNase_TatD. 1 hit.
TIGRFAMsTIGR00010. TIGR00010. 1 hit.
PROSITEPS01137. TATD_1. 1 hit.
PS01090. TATD_2. 1 hit.
PS01091. TATD_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8DGP0_LISMH
AccessionPrimary (citable) accession number: B8DGP0
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 25, 2012
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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