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Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Listeria monocytogenes serotype 4a (strain HCC23)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds directly to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S20UniRule annotation
Gene namesi
Name:rpsTUniRule annotation
Ordered Locus Names:LMHCC_1090
OrganismiListeria monocytogenes serotype 4a (strain HCC23)
Taxonomic identifieri552536 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001942501 – 8430S ribosomal protein S20Add BLAST84

Structurei

3D structure databases

ProteinModelPortaliB8DE31.
SMRiB8DE31.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS20 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000097049.
KOiK02968.
OMAiANKKSAM.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20. 1 hit.
InterProiView protein in InterPro
IPR002583. Ribosomal_S20.
PANTHERiPTHR33398. PTHR33398. 1 hit.
PfamiView protein in Pfam
PF01649. Ribosomal_S20p. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD004231. Ribosomal_S20. 1 hit.
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.

Sequencei

Sequence statusi: Complete.

B8DE31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPNIKSAIKR VKTAETRNSR NASQRSAMRT AIKKFDEAAA NNADNAKDLY
60 70 80
VEASKKLDSA VSKGLIHKNN AARNKSRLAA KLAK
Length:84
Mass (Da):9,169
Last modified:March 3, 2009 - v1
Checksum:i3DFEAED8BF642137
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001175 Genomic DNA. Translation: ACK39438.1.
RefSeqiWP_003726526.1. NC_011660.1.

Genome annotation databases

EnsemblBacteriaiACK39438; ACK39438; LMHCC_1090.
KEGGilmh:LMHCC_1090.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS20_LISMH
AccessioniPrimary (citable) accession number: B8DE31
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: June 7, 2017
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families