B8DCI2 (B8DCI2_LISMH) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 25.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Shikimate dehydrogenase 3 HAMAP MF_00222 EC=1.1.1.25 HAMAP MF_00222 | ||||||
| Gene names |
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| Organism | Listeria monocytogenes serotype 4a (strain HCC23) [Complete proteome] [HAMAP] EMBL ACK40485.1 | ||||||
| Taxonomic identifier | 552536 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria |
Protein attributes
| Sequence length | 291 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Shikimate + NADP+ = 3-dehydroshikimate + NADPH. HAMAP MF_00222 |
| Pathway | Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7. HAMAP MF_00222 |
| Sequence similarities | Belongs to the shikimate dehydrogenase family. HAMAP MF_00222 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Aromatic amino acid biosynthesis HAMAP MF_00222 |
| Ligand | NADP HAMAP MF_00222 |
| Molecular function | Oxidoreductase HAMAP MF_00222 EMBL ACK40485.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Molecular function | NADP binding Inferred from electronic annotation. Source: InterPro shikimate 3-dehydrogenase (NADP+) activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Nucleotide binding | 137 – 141 | 5 | NADP By similarity HAMAP MF_00222 | ||||||
Sites | |||||||||
| Active site | 77 | 1 | Proton acceptor By similarity HAMAP MF_00222 | ||||||
Sequences
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References
| [1] | "Genome sequence of lineage III Listeria monocytogenes strain HCC23." Steele C.L., Donaldson J.R., Paul D., Banes M.M., Arick T., Bridges S.M., Lawrence M.L. J. Bacteriol. 193:3679-3680(2011) [PubMed: 21602330] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HCC23. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001175 Genomic DNA. Translation: ACK40485.1. |
| RefSeq | YP_002351099.1. NC_011660.1. |
3D structure databases | |
| ProteinModelPortal | B8DCI2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | B8DCI2. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 7079495. |
| GenomeReviews | Gene locus LMHCC_2147 in contig CP001175_GR. |
| KEGG | lmh:LMHCC_2147. |
| PATRIC | 20319422. VBILisMon86872_2134. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG553408. |
| OMA | SIYIDAT. |
| ProtClustDB | PRK00258. |
Family and domain databases | |
| HAMAP | MF_00222. Shikimate_DH_AroE. [Tree] |
| InterPro | IPR016040. NAD(P)-bd_dom. IPR011342. Shikimate_DH. IPR013708. Shikimate_DH-bd_N. IPR022893. Shikimate_quinate_DH. IPR006151. Shikm_DH/Glu-tRNA_Rdtase. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| KO | K00014. |
| Pfam | PF01488. Shikimate_DH. 1 hit. PF08501. Shikimate_dh_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00507. AroE. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | B8DCI2_LISMH | ||||||||
| Accession | Primary (citable) accession number: B8DCI2 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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