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B8D8N4 (B8D8N4_BUCA5) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:fliM EMBL ACL30456.1
Ordered Locus Names:BUAP5A_079
OrganismBuchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) [Complete proteome] [HAMAP]
Taxonomic identifier563178 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length315 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentCell projection
Cilium
Flagellum EMBL ACL30456.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processchemotaxis

Inferred from electronic annotation. Source: InterPro

ciliary or flagellar motility

Inferred from electronic annotation. Source: InterPro

   Cellular componentbacterial-type flagellum basal body

Inferred from electronic annotation. Source: InterPro

   Molecular functionmotor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8D8N4 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: D29C1663F0218B33

FASTA31536,937
        10         20         30         40         50         60 
MLACLLITFT CEACKMGESK NLHNEIKILE KINRHFSDEF TKFFSNFLKN SVELVSCSIK 

        70         80         90        100        110        120 
IGSCTSNKEI ITNLRCLNLI EILPYKKKSF IIFPYNFLSN IIDILFGGQG DFKDHTKKIR 

       130        140        150        160        170        180 
DITSTESLVN KKIMKFITNA FSEIYKKYFV KEINFFNTKI FFDFKKYNFD LNKLFLINCF 

       190        200        210        220        230        240 
NFKINNTEIF FNFLIPKSIL KYQNEKKFFS TYDSHKNTCI EKNIENKVSL NDIYNVEVNI 

       250        260        270        280        290        300 
ISKIIGISVS YDKIYNLSVG DVLSIKKPNK ITGFIQDQAI FLGNYKRFNE QSIIFIEEFI 

       310 
DSSSESNQDK EYSNE 

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References

[1]"The dynamics and time scale of ongoing genomic erosion in symbiotic bacteria."
Moran N.A., McLaughlin H.J., Sorek R.
Science 323:379-382(2009) [PubMed: 19150844] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 5A.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001161 Genomic DNA. Translation: ACL30456.1.
RefSeqYP_002467843.1. NC_011833.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB8D8N4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBUCT00000000803; EBBUCP00000000758; EBBUCG00000000803.
GeneID7262767.
GenomeReviewsGene locus BUAP5A_079 in contig CP001161_GR.
KEGGbap:BUAP5A_079.
PATRIC21242379. VBIBucAph51993_0072.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000007990.
OMAVEVNIIS.
ProtClustDBCLSK315201.

Family and domain databases

InterProIPR001689. Flag_FliM.
IPR001543. SpoA.
[Graphical view]
KOK02416.
PfamPF02154. FliM. 1 hit.
PF01052. SpoA. 1 hit.
[Graphical view]
SUPFAMSSF101801. SpoA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8D8N4_BUCA5
AccessionPrimary (citable) accession number: B8D8N4
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)