B8D8J4 (B8D8J4_BUCA5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-binding protein hu-alpha EMBL ACL30416.1

Gene names

Name:	hupA EMBL ACL30416.1
Ordered Locus Names:	BUAP5A_031

Organism

Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) [Complete proteome] [HAMAP]

Taxonomic identifier

563178 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera

Protein attributes

Sequence length	92 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the bacterial histone-like protein family. RuleBase RU003939

Ontologies

Keywords
Ligand	DNA-binding EMBL ACL30416.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8D8J4 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 999E46F3A4BBA818	FASTA	92	10,032
	10 20 30 40 50 60 MNKTQLINVI SKKSNLSKTQ AKLTLETTLS TIIDSLKKGE SVQIVGFGTF KVNLRSSRTG 70 80 90 RNPQTGKEIQ IPATKVPSFT SGKTLKNAIK QL

References

[1]	"The dynamics and time scale of ongoing genomic erosion in symbiotic bacteria." Moran N.A., McLaughlin H.J., Sorek R. Science 323:379-382(2009) [PubMed: 19150844] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 5A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001161 Genomic DNA. Translation: ACL30416.1.
RefSeq	YP_002467803.1. NC_011833.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B8D8J4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBUCT00000000934; EBBUCP00000000889; EBBUCG00000000934.
GeneID	7262377.
GenomeReviews	Gene locus BUAP5A_031 in contig CP001161_GR.
KEGG	bap:BUAP5A_031.
PATRIC	21242283. VBIBucAph51993_0031.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000007762.
OMA	MNSITYE.
ProtClustDB	CLSK315016.
Family and domain databases
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K05787.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8D8J4_BUCA5

Accession

Primary (citable) accession number: B8D8J4

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)