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B8D6K1 (B8D6K1_DESK1) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA-binding protein EMBL ACL11732.1
Gene names
Ordered Locus Names:DKAM_1406
OrganismDesulfurococcus kamchatkensis (strain 1221n / DSM 18924) [Complete proteome] [HAMAP]
Taxonomic identifier490899 [NCBI]
Taxonomic lineageArchaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Desulfurococcus

Protein attributes

Sequence length216 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   LigandDNA-binding EMBL ACL11732.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8D6K1 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 58E03398913428EF

FASTA21625,507
        10         20         30         40         50         60 
MSHRDHNFRY KRHGERRWDE RHEPALYVLD YLELGNPSDP HYEHRNQPFI QGIGVKYFSL 

        70         80         90        100        110        120 
LEATPLPAVK IEILEKIDLG YPSKVKRIIH IVYSELTSVA KTNLPEALKN IVLENEKIFV 

       130        140        150        160        170        180 
EFFNIAEPVN IRLHALELLP EIGKKTMNQI LEERSKKRFE SFEDIKKRTR IDPVKALVNR 

       190        200        210 
VIKELIGGEK YYLFIKSPEP NTLYLGYLEK LYGELY

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References

[1]"Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis."
Ravin N.V., Mardanov A.V., Beletsky A.V., Kublanov I.V., Kolganova T.V., Lebedinsky A.V., Chernyh N.A., Bonch-Osmolovskaya E.A., Skryabin K.G.
J. Bacteriol. 191:2371-2379(2009) [PubMed: 19114480] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001140 Genomic DNA. Translation: ACL11732.1.
RefSeqYP_002429099.1. NC_011766.1.

3D structure databases

ProteinModelPortalB8D6K1.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8D6K1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7171442.
GenomeReviewsGene locus DKAM_1406 in contig CP001140_GR.
KEGGdka:DKAM_1406.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG512886.
OMAYAYVLDY.
ProtClustDBCLSK2534315.

Family and domain databases

InterProIPR007003. DUF655.
IPR012340. NA-bd_OB-fold.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK07572.
PfamPF04919. DUF655. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8D6K1_DESK1
AccessionPrimary (citable) accession number: B8D6K1
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: November 16, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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