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B8D5W2

- RNP1_DESK1

UniProt

B8D5W2 - RNP1_DESK1

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Protein
Ribonuclease P protein component 1
Gene
rnp1, DKAM_1167
Organism
Desulfurococcus kamchatkensis (strain 1221n / DSM 18924)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends By similarity.UniRule annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. ribonuclease P activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. mRNA cleavage Source: InterPro
  2. rRNA processing Source: InterPro
  3. tRNA 5'-leader removal Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

tRNA processing

Enzyme and pathway databases

BioCyciDKAM490899:GHYH-1200-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein component 1 (EC:3.1.26.5)
Short name:
RNase P component 1
Alternative name(s):
Rpp29
Gene namesi
Name:rnp1
Ordered Locus Names:DKAM_1167
OrganismiDesulfurococcus kamchatkensis (strain 1221n / DSM 18924)
Taxonomic identifieri490899 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeDesulfurococcus
ProteomesiUP000006903: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
  2. ribonuclease MRP complex Source: InterPro
  3. ribonuclease P complex Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9292Ribonuclease P protein component 1UniRule annotation
PRO_1000148362Add
BLAST

Interactioni

Subunit structurei

Consists of a catalytic RNA component and at least 4-5 protein subunits By similarity.

Protein-protein interaction databases

STRINGi490899.DKAM_1167.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1588.
HOGENOMiHOG000231353.
KOiK03538.
OMAiRILQYPD.

Family and domain databases

Gene3Di2.30.30.210. 1 hit.
HAMAPiMF_00754. RNase_P_1.
InterProiIPR002730. RNase_P/MRP_p29.
IPR023538. RNase_P_comp-1.
IPR023534. Rof/RNase_P-like.
[Graphical view]
PfamiPF01868. UPF0086. 1 hit.
[Graphical view]
SUPFAMiSSF101744. SSF101744. 1 hit.

Sequencei

Sequence statusi: Complete.

B8D5W2-1 [UniParc]FASTAAdd to Basket

« Hide

MRVNSRNIAY HELIGLEVRI LQYPDPSLVG LKGKVVDETL KTLVIETPSG   50
RRVRIFKFNS ILEFMLPDGE AVVIKGSTII GRPWDRLKMV SR 92
Length:92
Mass (Da):10,478
Last modified:March 3, 2009 - v1
Checksum:i383D9151C2CAF52A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001140 Genomic DNA. Translation: ACL11493.1.
RefSeqiWP_012608834.1. NC_011766.1.
YP_002428860.1. NC_011766.1.

Genome annotation databases

EnsemblBacteriaiACL11493; ACL11493; DKAM_1167.
GeneIDi7171641.
KEGGidka:DKAM_1167.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001140 Genomic DNA. Translation: ACL11493.1 .
RefSeqi WP_012608834.1. NC_011766.1.
YP_002428860.1. NC_011766.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 490899.DKAM_1167.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACL11493 ; ACL11493 ; DKAM_1167 .
GeneIDi 7171641.
KEGGi dka:DKAM_1167.

Phylogenomic databases

eggNOGi COG1588.
HOGENOMi HOG000231353.
KOi K03538.
OMAi RILQYPD.

Enzyme and pathway databases

BioCyci DKAM490899:GHYH-1200-MONOMER.

Family and domain databases

Gene3Di 2.30.30.210. 1 hit.
HAMAPi MF_00754. RNase_P_1.
InterProi IPR002730. RNase_P/MRP_p29.
IPR023538. RNase_P_comp-1.
IPR023534. Rof/RNase_P-like.
[Graphical view ]
Pfami PF01868. UPF0086. 1 hit.
[Graphical view ]
SUPFAMi SSF101744. SSF101744. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis."
    Ravin N.V., Mardanov A.V., Beletsky A.V., Kublanov I.V., Kolganova T.V., Lebedinsky A.V., Chernyh N.A., Bonch-Osmolovskaya E.A., Skryabin K.G.
    J. Bacteriol. 191:2371-2379(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1221n / DSM 18924.

Entry informationi

Entry nameiRNP1_DESK1
AccessioniPrimary (citable) accession number: B8D5W2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 3, 2009
Last modified: September 3, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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