B8D5M1 (B8D5M1_DESK1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Peptidyl-tRNA hydrolase HAMAP MF_00628
Short name=PTH HAMAP MF_00628
EC=3.1.1.29 HAMAP MF_00628

Gene names

Name:	pth HAMAP MF_00628
Ordered Locus Names:	DKAM_1076

Organism

Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) [Complete proteome] [HAMAP]

Taxonomic identifier

490899 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Desulfurococcus

Protein attributes

Sequence length	115 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00628
Catalytic activity	N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00628
Subcellular location	Cytoplasm By similarity HAMAP MF_00628.
Sequence similarities	Belongs to the PTH2 family. HAMAP MF_00628

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP MF_00628
Molecular function	Hydrolase HAMAP MF_00628 EMBL ACL11402.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	aminoacyl-tRNA hydrolase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8D5M1 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 8D2A59A1EF2421D0	FASTA	115	12,618
	10 20 30 40 50 60 MKQVIVVRSD LEMSKGKIAA QVAHASVIAA FEAYYNHREW FNEWWNSGQK KIVVKVRGEE 70 80 90 100 110 ELVKIYMEAI SNGLPASIVR DAGLTELPPG TITAVAIGPA PDDRVDKLTG GLKLL

References

[1]

"Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis." Ravin N.V., Mardanov A.V., Beletsky A.V., Kublanov I.V., Kolganova T.V., Lebedinsky A.V., Chernyh N.A., Bonch-Osmolovskaya E.A., Skryabin K.G. J. Bacteriol. 191:2371-2379(2009) [PubMed: 19114480] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001140 Genomic DNA. Translation: ACL11402.1.
RefSeq	YP_002428769.1. NC_011766.1.
3D structure databases
ProteinModelPortal	B8D5M1.
ModBase	Search...
Protein-protein interaction databases
STRING	B8D5M1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7171180.
GenomeReviews	Gene locus DKAM_1076 in contig CP001140_GR.
KEGG	dka:DKAM_1076.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG526257.
OMA	KSLVMEY.
ProtClustDB	PRK04322.
Family and domain databases
HAMAP	MF_00628. Pept_tRNA_hydro_arch. [Tree]
InterPro	IPR023476. Pep_tRNA_hydro_II_dom. IPR002833. Pep_tRNA_hydro_PTH2. [Graphical view]
Gene3D	G3DSA:3.40.1490.10. G3DSA:3.40.1490.10. 1 hit.
KO	K04794.
PANTHER	PTHR12649:SF6. PTHR12649:SF6. 1 hit.
Pfam	PF01981. PTH2. 1 hit. [Graphical view]
SUPFAM	SSF102462. SSF102462. 1 hit.
TIGRFAMs	TIGR00283. Arch_pth2. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B8D5M1_DESK1

Accession

Primary (citable) accession number: B8D5M1

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	November 16, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)