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B8D4Z1 (B8D4Z1_DESK1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:DKAM_0846
OrganismDesulfurococcus kamchatkensis (strain 1221n / DSM 18924) [Complete proteome] [HAMAP] EMBL ACL11172.1
Taxonomic identifier490899 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeDesulfurococcus

Protein attributes

Sequence length471 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncofactor binding

Inferred from electronic annotation. Source: InterPro

nucleotide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8D4Z1 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 00D5FEE7A4403ECE

FASTA47151,197
        10         20         30         40         50         60 
MLFSIDWCGN MVKELFRPRS IAVIGASRTP GKIGYIVLRN IKGYGFQGKV YPINPHADEI 

        70         80         90        100        110        120 
LGYKAYPSIL DVPDEVDVAI VTVPADNVPE VIEESGRKGV KVAVVITSGF SEVGNVELEN 

       130        140        150        160        170        180 
KIVETARKYG MRILGPNIFG YVYTPSNINA TFGPLEVARG SIALISQSGA LGIALMGWTI 

       190        200        210        220        230        240 
MNEIGLSALL SVGNMADLDV AELSEYLADD PNTRVITIYL EGIKPGRGGE FIKKMREVTL 

       250        260        270        280        290        300 
KKPVVVIKAG RSRRGAAAAA SHTGSLAGSD NLYEAAFKQA GIIRAYTVEE MFDIARVFAA 

       310        320        330        340        350        360 
QPLPRGENTI IITNGGGVGV LATDAAEFND VKLLEPSQEL KERLKTTMPW FGSAKNPVDL 

       370        380        390        400        410        420 
TGQAVVDNYV KALKIAAESS EVDNIVILYC RTAVLDPREL AKAIVELYES EHISKTTVAG 

       430        440        450        460        470 
FVGGEDTYEA IKYLNRHDIP AYPSPERAVY ALSKMIWYRR YLEARKASPQ A 

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References

[1]"Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis."
Ravin N.V., Mardanov A.V., Beletsky A.V., Kublanov I.V., Kolganova T.V., Lebedinsky A.V., Chernyh N.A., Bonch-Osmolovskaya E.A., Skryabin K.G.
J. Bacteriol. 191:2371-2379(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1221n / DSM 18924.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001140 Genomic DNA. Translation: ACL11172.1.
RefSeqYP_002428539.1. NC_011766.1.

3D structure databases

ProteinModelPortalB8D4Z1.
ModBaseSearch...

Protein-protein interaction databases

STRING490899.DKAM_0846.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL11172; ACL11172; DKAM_0846.
GeneID7170991.
KEGGdka:DKAM_0846.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1042.
HOGENOMHOG000220089.
KOK01905.
OMAMPWFGSA.
ProtClustDBCLSK689510.

Enzyme and pathway databases

BioCycDKAM490899:GHYH-855-MONOMER.

Family and domain databases

Gene3D3.40.50.261. 2 hits.
3.40.50.720. 1 hit.
InterProIPR014089. AcCoA-synth-alpha.
IPR003781. CoA-bd.
IPR016040. NAD(P)-bd_dom.
IPR016102. Succinyl-CoA_synth-like.
[Graphical view]
PfamPF13380. CoA_binding_2. 1 hit.
[Graphical view]
SMARTSM00881. CoA_binding. 1 hit.
[Graphical view]
SUPFAMSSF52210. CoA_ligase. 2 hits.
TIGRFAMsTIGR02717. AcCoA-syn-alpha. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8D4Z1_DESK1
AccessionPrimary (citable) accession number: B8D4Z1
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)