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Protein
Submitted name:

Alpha-amylase

Gene

DKAM_0350

Organism
Desulfurococcus kamchatkensis (strain 1221n / DSM 18924)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciDKAM490899:GHYH-354-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Ordered Locus Names:DKAM_0350Imported
OrganismiDesulfurococcus kamchatkensis (strain 1221n / DSM 18924)Imported
Taxonomic identifieri490899 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeDesulfurococcus
ProteomesiUP000006903 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi490899.DKAM_0350.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 57 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1449.
HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

B8D3J5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDIVLMFEV HQPYRLRRNL HSILLEKALS GRLELKDLED IVFDNELNRL
60 70 80 90 100
VIERAAHRCY VPATQIILEN VKRYMDTSKE FKASFSISGV FIEQAEKWRP
110 120 130 140 150
DVVDLFRKLA ETGRIEFIEQ TYYHSMAAFL PYYGFEELRE QIREHRRIIE
160 170 180 190 200
ETIGFKPVSI ENTEFTYNND IACLFDSEGY KAVLTEGVDR VLGWRSPNYV
210 220 230 240 250
YKAFGCNIRV LTRNYRLSDD VGFRFSDRKW DQYPLTADKY ASWLASTPGD
260 270 280 290 300
VIFIAVDYET FGEHHWPETG IHEFLRWLPG EVLKYGHLYF STPGEVVERY
310 320 330 340 350
PVRDVIDVPP WSSISWADER DLSAWLGNEI QREAYNALAA IRPFIKAVNK
360 370 380 390 400
PEITRLWKLL TISDHVYYMA TKFGSIGEVH SYFSPYKNAN IAYGLFMEAL
410 420 430 440 450
GVLVEAVRRE IEANRKSVLG RLVLPDNKAF HFTLPTGEHT GLVAHSIREF
460 470 480 490 500
IEVIEKVPPE SLLYHFNKGD IDAWLLNIFG LGDVVEELRR LRENIISYSE
510
LISTLKKLLL EIIE
Length:514
Mass (Da):59,861
Last modified:March 3, 2009 - v1
Checksum:iC14D620E533F6901
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001140 Genomic DNA. Translation: ACL10676.1.
RefSeqiWP_012608018.1. NC_011766.1.
YP_002428043.1. NC_011766.1.

Genome annotation databases

EnsemblBacteriaiACL10676; ACL10676; DKAM_0350.
GeneIDi7170611.
KEGGidka:DKAM_0350.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001140 Genomic DNA. Translation: ACL10676.1.
RefSeqiWP_012608018.1. NC_011766.1.
YP_002428043.1. NC_011766.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi490899.DKAM_0350.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL10676; ACL10676; DKAM_0350.
GeneIDi7170611.
KEGGidka:DKAM_0350.

Phylogenomic databases

eggNOGiCOG1449.
HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.

Enzyme and pathway databases

BioCyciDKAM490899:GHYH-354-MONOMER.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis."
    Ravin N.V., Mardanov A.V., Beletsky A.V., Kublanov I.V., Kolganova T.V., Lebedinsky A.V., Chernyh N.A., Bonch-Osmolovskaya E.A., Skryabin K.G.
    J. Bacteriol. 191:2371-2379(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1221n / DSM 18924Imported.

Entry informationi

Entry nameiB8D3J5_DESK1
AccessioniPrimary (citable) accession number: B8D3J5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: April 1, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.