B8D2X0 (B8D2X0_DESK1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Phenylalanyl-tRNA synthetase subunit beta EMBL ACL10517.1

Gene names

Ordered Locus Names:

DKAM_0189

Organism

Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) [Complete proteome] [HAMAP] EMBL ACL10517.1

Taxonomic identifier

490899 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Desulfurococcus › Desulfurococcus kamchatkensis

Protein attributes

Sequence length	557 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Aminoacyl-tRNA synthetase EMBL ACL10517.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	phenylalanyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro magnesium ion binding Inferred from electronic annotation. Source: InterPro phenylalanine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8D2X0 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 36B853EFC9166506	FASTA	557	62,181
	10 20 30 40 50 60 MPVIRVSISD IEALLGSRVT LEKLYKGLTK LKCEVDNVEG DILEYEANHD RPDLFSAEGL 70 80 90 100 110 120 ARALRPFLGL EGKQYHIVNS SIKGYSEGIP GRPYIALAVV RDVVLNEEAI VQIMQLQEKL 130 140 150 160 170 180 ASTYGRARRK ASIGVYDLDK IKPPIYYRAV NPYETKYRPL NENREMTLRE VLSETEKGRL 190 200 210 220 230 240 YGYIIESMER YPVLMDSEGT ILSLAPILNS DDNKVTTNTR NILIDSTGLN PEIVVDMVTI 250 260 270 280 290 300 MAVNIAERSK NRIIEVVGVE HPSGLIIEAP RRTGNFISVN LSDVSRLIGV DISVEDAVRY 310 320 330 340 350 360 LSLHYYTVRS IEGRVLTVEA PIYRLDARSW VDVAEDIAIS HGYDAIGRQA DSLPYSTSIG 370 380 390 400 410 420 KIHPLEYISR RVRDILVGLG FIEIANYMMT SIESQTTLMG YNQGIFVVEN PKSDRYTAIR 430 440 450 460 470 480 SWLTPGIIEA IIENKGKRAR LAVFEIGDVV LPDESMETNA RVERRIGIAV SHEKATLTDG 490 500 510 520 530 540 LAVVRTLFKE LGVTLSFEKT MVPGLLPERT AAINVNGEQI GFVGEVKPEI LYKLGLMNPV 550 IVSEINLNKI IKLLATN

References

[1]

"Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis." Ravin N.V., Mardanov A.V., Beletsky A.V., Kublanov I.V., Kolganova T.V., Lebedinsky A.V., Chernyh N.A., Bonch-Osmolovskaya E.A., Skryabin K.G. J. Bacteriol. 191:2371-2379(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 1221n / DSM 18924.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001140 Genomic DNA. Translation: ACL10517.1.
RefSeq	YP_002427884.1. NC_011766.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	490899.DKAM_0189.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACL10517; ACL10517; DKAM_0189.
GeneID	7170490.
KEGG	dka:DKAM_0189.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0072.
HOGENOM	HOG000105094.
KO	K01890.
OMA	FFPNRPD.
ProtClustDB	PRK09616.
Enzyme and pathway databases
BioCyc	DKAM490899:GHYH-194-MONOMER.
Family and domain databases
Gene3D	3.30.56.20. 1 hit.
InterPro	IPR005146. B3/B4_tRNA-bd. IPR009061. DNA-bd_dom_put. IPR004531. Phe-tRNA-synth_IIc_bsu_arc. IPR020825. Phe-tRNA_synthase_B3/B4. IPR002319. Phenylalanyl-tRNA_Synthase. IPR005147. tRNA_synthase_B5-dom. [Graphical view]
Pfam	PF03483. B3_4. 1 hit. PF03484. B5. 1 hit. PF01409. tRNA-synt_2d. 1 hit. [Graphical view]
SMART	SM00873. B3_4. 1 hit. SM00874. B5. 1 hit. [Graphical view]
SUPFAM	SSF56037. B3_4. 1 hit. SSF46955. Putativ_DNA_bind. 2 hits.
TIGRFAMs	TIGR00471. pheT_arch. 1 hit.
PROSITE	PS51483. B5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8D2X0_DESK1

Accession

Primary (citable) accession number: B8D2X0

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)