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B8D1U7 (B8D1U7_HALOH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.39 EMBL ACL69174.1
Gene names
Ordered Locus Names:Hore_04160
OrganismHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) [Complete proteome] [HAMAP]
Taxonomic identifier373903 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaHalanaerobialesHalanaerobiaceaeHalothermothrix

Protein attributes

Sequence length1067 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 2 fibronectin type-III domains. RuleBase RU000718

Sequences

Sequence LengthMass (Da)Tools
B8D1U7 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: A788C6F524CC1982

FASTA1,067118,727
        10         20         30         40         50         60 
MSKNKLLLFM MLMVLLLFTY TVSGAVPNEG VVSVGAGSYV DVFPSGIDQS NPDNTDIQEN 

        70         80         90        100        110        120 
IYITSNMEGR PIPTNDWWSS LVWEGVSDDG HYVQAAHPFL IKLEARGMRL FAPKTEDFWV 

       130        140        150        160        170        180 
IDNAYGATMA VGNSQDFVLG NSLSTTMEAY LHDFSDWFVT ASMEGGSASM KLTYGHGSPY 

       190        200        210        220        230        240 
VYAIYESGNP TLTFDTPPTI WYDNSYTKVI GFSIEGRNYA AFAPEGSTWS GIGTTTITCN 

       250        260        270        280        290        300 
LPGGSNYFSV AALPPGEPDT LLPLFEQYAY NHIINTEVVW EYVESSSEVI TSYNYTVTQY 

       310        320        330        340        350        360 
EGSETGTLFA LYPHQWRNLQ QGNLQNYSYT TARGEMKLAQ GTSFTTSMKF PGVLSALPPL 

       370        380        390        400        410        420 
ETQTDLDRLY SYVDSARNEP FTSTDTYYVG KRLGKLATII PIAEQVNHTT AASEFRNELR 

       430        440        450        460        470        480 
TRLENWFNAT NDDGSAYVRD IFYYNNNWKT LIGFDASFGS ANQLNDHHFH YGYFIKGAAE 

       490        500        510        520        530        540 
IARTDRTWAS ESQYGEMVNL LIRDIACPDR NDPMFPFLRN FDIYAGHSWA SGHARFADGN 

       550        560        570        580        590        600 
NNESSSEAMN AWTALILWGE YTNSPEIKEL GIYLYTTEMH AIYEYWFNIY NENYPDTFSK 

       610        620        630        640        650        660 
PMTAMVWGCK QDYATWFSAA PEAIQGIVLL PIQAGSLYLG HDPNYCQLYF DFLVDQRGSS 

       670        680        690        700        710        720 
DFAQWDAIFY AYEALFDPDQ ALQDFFTYEN QLLNSTSGPT AATEEGNTVA NTYHWIKNLQ 

       730        740        750        760        770        780 
RLGRVDHSVV ATNHALYAVF QQTDGTRTYV AYNPTDNGKT VNFSDGGNLY VAPHSYGVST 

       790        800        810        820        830        840 
DSPVINPPSS PVLNSAIAGD AQVTLDWNSV SGATGYKVYY GTASGEYNNV QTVSDITSYT 

       850        860        870        880        890        900 
VTGLTNDTTY YFVITATNSA GESGYSNELS ATPQPELNNP PVEPNLNSAT AGDGEVSLSW 

       910        920        930        940        950        960 
DSVSGVTGYN LHYGTSSGSY SVTIDVGNST SYTVTGLNNN TTYYFAVTAY NDNGESGYSN 

       970        980        990       1000       1010       1020 
ELSATPQAES SDDHGAEYVS PTEALFWVDD GGDPSTQDYG WVIVYIGPDP STSLHEKPGY 

      1030       1040       1050       1060 
HMSYNSSLDR WEYTKADMHD NDGNPWEYQF NFNDQELSEE YLYYHQP 

« Hide

References

[1]"Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii."
Mavromatis K., Ivanova N., Anderson I., Lykidis A., Hooper S.D., Sun H., Kunin V., Lapidus A., Hugenholtz P., Patel B., Kyrpides N.C.
PLoS ONE 4:E4192-E4192(2009) [PubMed: 19145256] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001098 Genomic DNA. Translation: ACL69174.1.
RefSeqYP_002508169.1. NC_011899.1.

3D structure databases

ProteinModelPortalB8D1U7.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8D1U7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7314091.
GenomeReviewsGene locus Hore_04160 in contig CP001098_GR.
KEGGhor:Hore_04160.
PATRIC22100132. VBIHalOre56292_0450.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG502713.
OMAYLYTTEM.

Family and domain databases

InterProIPR003961. Fibronectin_type3.
IPR005200. Glyco_hydro_81.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:2.60.40.10. Ig-like_fold. 2 hits.
PfamPF00041. fn3. 2 hits.
PF03639. Glyco_hydro_81. 1 hit.
[Graphical view]
SMARTSM00060. FN3. 2 hits.
[Graphical view]
SUPFAMSSF49265. FN_III-like. 2 hits.
PROSITEPS50853. FN3. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8D1U7_HALOH
AccessionPrimary (citable) accession number: B8D1U7
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)