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B8D1M5

- B8D1M5_HALOH

UniProt

B8D1M5 - B8D1M5_HALOH

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Protein
Submitted name: DNA polymerase LigD polymerase domain protein
Gene
Hore_03410
Organism
Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Enzyme and pathway databases

    BioCyciHORE373903:GHB1-366-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD polymerase domain proteinImported
    Gene namesi
    Ordered Locus Names:Hore_03410Imported
    OrganismiHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)Imported
    Taxonomic identifieri373903 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaHalanaerobialesHalanaerobiaceaeHalothermothrix
    ProteomesiUP000000719: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi373903.Hore_03410.

    Structurei

    3D structure databases

    ProteinModelPortaliB8D1M5.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000244654.
    KOiK01971.
    OMAiKPLWPEA.
    OrthoDBiEOG6FV833.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B8D1M5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLTIGKHDV QLTNLDKVLW PELGYTKGDL INYYINMYPY LKEYLLNRPL    50
    SMKSYPDGIN GKSFYQKDCP DYAPHWLSTY GIFSGHRKDI INWVTINKLS 100
    DLVWVANRAS IELHTWFSTT TNLDKPDFAV FDLDPGSKSS MKDVVDIALT 150
    IKNILDEFNV RSFVKTSGKR GLHVYIPVKT RYTYKEIRSF LQNVAEMVIK 200
    LKPEQATVEW RKNKRQGKVY IDYRQNGKSK TLPAPYSLRP TSKATVSTPL 250
    KWSEITPDLN PDNYNIKNIE TRIKQKGNIW ETLLKIRQEL PGLFLGLLLF 300
    LSFSLFGGLN TFL 313
    Length:313
    Mass (Da):36,247
    Last modified:March 3, 2009 - v1
    Checksum:i4474369312ABCCE0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001098 Genomic DNA. Translation: ACL69102.1.
    RefSeqiWP_012635290.1. NC_011899.1.
    YP_002508097.1. NC_011899.1.

    Genome annotation databases

    EnsemblBacteriaiACL69102; ACL69102; Hore_03410.
    GeneIDi7314729.
    KEGGihor:Hore_03410.
    PATRICi22099954. VBIHalOre56292_0362.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001098 Genomic DNA. Translation: ACL69102.1 .
    RefSeqi WP_012635290.1. NC_011899.1.
    YP_002508097.1. NC_011899.1.

    3D structure databases

    ProteinModelPortali B8D1M5.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 373903.Hore_03410.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACL69102 ; ACL69102 ; Hore_03410 .
    GeneIDi 7314729.
    KEGGi hor:Hore_03410.
    PATRICi 22099954. VBIHalOre56292_0362.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000244654.
    KOi K01971.
    OMAi KPLWPEA.
    OrthoDBi EOG6FV833.

    Enzyme and pathway databases

    BioCyci HORE373903:GHB1-366-MONOMER.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii."
      Mavromatis K., Ivanova N., Anderson I., Lykidis A., Hooper S.D., Sun H., Kunin V., Lapidus A., Hugenholtz P., Patel B., Kyrpides N.C.
      PLoS ONE 4:E4192-E4192(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: H 168 / OCM 544 / DSM 9562.

    Entry informationi

    Entry nameiB8D1M5_HALOH
    AccessioniPrimary (citable) accession number: B8D1M5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: September 3, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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