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B8CZC1 (B8CZC1_HALOH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056
Ordered Locus Names:Hore_18920
OrganismHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) [Complete proteome] [HAMAP]
Taxonomic identifier373903 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Halanaerobiales › Halanaerobiaceae › Halothermothrix

Protein attributes

Sequence length279 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
B8CZC1 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 90875A822BC4D73B

FASTA27930,471
        10         20         30         40         50         60 
MLDKVKKVKL NQDIVFGDSN RPLVLIAGPC VLEEEDRVLK IAETVKEITS RLGIPYVFKS 

        70         80         90        100        110        120 
SYDKANRSSI KSFRGPGLED GLKLLERVKR EVGVPLLTDV HEPDQAALAA EVVDIVQIPA 

       130        140        150        160        170        180 
FLSRQTDLVV AAGRTGKIVN VKKGQFLAPW DIDRVVEKIE STGNEKILLT ERGVSFGYNN 

       190        200        210        220        230        240 
LVVDMRSLPR MRETGYPVVF DATHSVQLPG GAGETSGGDR KFVPYLTRAA VGTGVDALFM 

       250        260        270 
EVHDNPDVAL SDGPNMVPLD QLEGILIKAL AIDEIVKGR

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References

[1]"Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii."
Mavromatis K., Ivanova N., Anderson I., Lykidis A., Hooper S.D., Sun H., Kunin V., Lapidus A., Hugenholtz P., Patel B., Kyrpides N.C.
PLoS ONE 4:E4192-E4192(2009) [PubMed: 19145256] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001098 Genomic DNA. Translation: ACL70640.1.
RefSeqYP_002509635.1. NC_011899.1.

3D structure databases

ProteinModelPortalB8CZC1.
SMRB8CZC1. Positions 22-277.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8CZC1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7312707.
GenomeReviewsGene locus Hore_18920 in contig CP001098_GR.
KEGGhor:Hore_18920.
PATRIC22103334. VBIHalOre56292_2017.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG575990.
OMAESRDHAF.
ProtClustDBCLSK2806569.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8CZC1_HALOH
AccessionPrimary (citable) accession number: B8CZC1
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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