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B8CRI9 (B8CRI9_SHEPW) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL ACJ29997.1
Gene names
Ordered Locus Names:swp_3293 EMBL ACJ29997.1
OrganismShewanella piezotolerans (strain WP3 / JCM 13877) [Complete proteome] [HAMAP] EMBL ACJ29997.1
Taxonomic identifier225849 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length548 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
B8CRI9 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 3D4D1B3D6FC498BD

FASTA54860,694
        10         20         30         40         50         60 
MTPRRATASE EALLRIFTVP EAPDSTLSVI EQNISQNLMG FLQESVVAVE KPLTEIELDF 

        70         80         90        100        110        120 
QQHQIPAAPQ FVSDYADDMM QTLVAHSVHT SAPSFIGHMT SALPYFVLPL SKMMVGLNQN 

       130        140        150        160        170        180 
LVKIETSKAF TPLERQVLGM MHHLIYAEND DFYQNWMHSA NVSLGAFCSG GTVANITALW 

       190        200        210        220        230        240 
TARNQLLKAD GNYRGVAAQG VMKGLRHYGY DDLAILVSER GHYSLGKTAD LLGIGRENII 

       250        260        270        280        290        300 
QVPTAEDNKV DVSKMRKLAN QLAADKIKVM AIVGVAGTTE TGNIDPLNEL ADLASELNCH 

       310        320        330        340        350        360 
FHVDAAWGGA SLLSEKYRHL LAGIERADSV TIDAHKQMYV PMGAGMVIFK DPTFANAIKH 

       370        380        390        400        410        420 
HAEYILRKGS KDLGSQTLEG SRPGMAMLVH ACLKVIGRDG YEILINNSLE KARYFADLIN 

       430        440        450        460        470        480 
QHQDFELVSK PELCLLTYRY VPQKVQIAMA NARANNDVDK LSEFNSLLDG LTKFVQKRQR 

       490        500        510        520        530        540 
EQGTSFVSRT RINPEKAHLM DIKAVVFRVV LANPLTTPEI LQQVLAEQKV IASQEQRFLP 


NLLALAER 

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References

[1]"Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WP3 / JCM 13877.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000472 Genomic DNA. Translation: ACJ29997.1.
RefSeqYP_002312584.1. NC_011566.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING225849.swp_3293.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACJ29997; ACJ29997; swp_3293.
GeneID7034282.
KEGGswp:swp_3293.
PATRIC23545040. VBIShePie65056_3033.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAALGAFCS.
OrthoDBEOG6MSRZP.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycSPIE225849:GH6V-3214-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8CRI9_SHEPW
AccessionPrimary (citable) accession number: B8CRI9
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: February 19, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)