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B8CRI9

- B8CRI9_SHEPW

UniProt

B8CRI9 - B8CRI9_SHEPW

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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene
swp_3293
Organism
Shewanella piezotolerans (strain WP3 / JCM 13877)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSPIE225849:GH6V-3214-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:swp_3293Imported
OrganismiShewanella piezotolerans (strain WP3 / JCM 13877)Imported
Taxonomic identifieri225849 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000000753: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi225849.swp_3293.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiGMMHNLV.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

B8CRI9-1 [UniParc]FASTAAdd to Basket

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MTPRRATASE EALLRIFTVP EAPDSTLSVI EQNISQNLMG FLQESVVAVE    50
KPLTEIELDF QQHQIPAAPQ FVSDYADDMM QTLVAHSVHT SAPSFIGHMT 100
SALPYFVLPL SKMMVGLNQN LVKIETSKAF TPLERQVLGM MHHLIYAEND 150
DFYQNWMHSA NVSLGAFCSG GTVANITALW TARNQLLKAD GNYRGVAAQG 200
VMKGLRHYGY DDLAILVSER GHYSLGKTAD LLGIGRENII QVPTAEDNKV 250
DVSKMRKLAN QLAADKIKVM AIVGVAGTTE TGNIDPLNEL ADLASELNCH 300
FHVDAAWGGA SLLSEKYRHL LAGIERADSV TIDAHKQMYV PMGAGMVIFK 350
DPTFANAIKH HAEYILRKGS KDLGSQTLEG SRPGMAMLVH ACLKVIGRDG 400
YEILINNSLE KARYFADLIN QHQDFELVSK PELCLLTYRY VPQKVQIAMA 450
NARANNDVDK LSEFNSLLDG LTKFVQKRQR EQGTSFVSRT RINPEKAHLM 500
DIKAVVFRVV LANPLTTPEI LQQVLAEQKV IASQEQRFLP NLLALAER 548
Length:548
Mass (Da):60,694
Last modified:March 3, 2009 - v1
Checksum:i3D4D1B3D6FC498BD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000472 Genomic DNA. Translation: ACJ29997.1.
RefSeqiYP_002312584.1. NC_011566.1.

Genome annotation databases

EnsemblBacteriaiACJ29997; ACJ29997; swp_3293.
GeneIDi7034282.
KEGGiswp:swp_3293.
PATRICi23545040. VBIShePie65056_3033.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000472 Genomic DNA. Translation: ACJ29997.1 .
RefSeqi YP_002312584.1. NC_011566.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 225849.swp_3293.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACJ29997 ; ACJ29997 ; swp_3293 .
GeneIDi 7034282.
KEGGi swp:swp_3293.
PATRICi 23545040. VBIShePie65056_3033.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi GMMHNLV.
OrthoDBi EOG6MSRZP.

Enzyme and pathway databases

BioCyci SPIE225849:GH6V-3214-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
    Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
    PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WP3 / JCM 13877.

Entry informationi

Entry nameiB8CRI9_SHEPW
AccessioniPrimary (citable) accession number: B8CRI9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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