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B8CRI9

- B8CRI9_SHEPW

UniProt

B8CRI9 - B8CRI9_SHEPW

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

swp_3293

Organism
Shewanella piezotolerans (strain WP3 / JCM 13877)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationImported

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSPIE225849:GH6V-3214-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported (EC:4.1.1.15Imported)
    Gene namesi
    Ordered Locus Names:swp_3293Imported
    OrganismiShewanella piezotolerans (strain WP3 / JCM 13877)Imported
    Taxonomic identifieri225849 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000000753: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi225849.swp_3293.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiGMMHNLV.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B8CRI9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTPRRATASE EALLRIFTVP EAPDSTLSVI EQNISQNLMG FLQESVVAVE    50
    KPLTEIELDF QQHQIPAAPQ FVSDYADDMM QTLVAHSVHT SAPSFIGHMT 100
    SALPYFVLPL SKMMVGLNQN LVKIETSKAF TPLERQVLGM MHHLIYAEND 150
    DFYQNWMHSA NVSLGAFCSG GTVANITALW TARNQLLKAD GNYRGVAAQG 200
    VMKGLRHYGY DDLAILVSER GHYSLGKTAD LLGIGRENII QVPTAEDNKV 250
    DVSKMRKLAN QLAADKIKVM AIVGVAGTTE TGNIDPLNEL ADLASELNCH 300
    FHVDAAWGGA SLLSEKYRHL LAGIERADSV TIDAHKQMYV PMGAGMVIFK 350
    DPTFANAIKH HAEYILRKGS KDLGSQTLEG SRPGMAMLVH ACLKVIGRDG 400
    YEILINNSLE KARYFADLIN QHQDFELVSK PELCLLTYRY VPQKVQIAMA 450
    NARANNDVDK LSEFNSLLDG LTKFVQKRQR EQGTSFVSRT RINPEKAHLM 500
    DIKAVVFRVV LANPLTTPEI LQQVLAEQKV IASQEQRFLP NLLALAER 548
    Length:548
    Mass (Da):60,694
    Last modified:March 3, 2009 - v1
    Checksum:i3D4D1B3D6FC498BD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000472 Genomic DNA. Translation: ACJ29997.1.
    RefSeqiYP_002312584.1. NC_011566.1.

    Genome annotation databases

    EnsemblBacteriaiACJ29997; ACJ29997; swp_3293.
    GeneIDi7034282.
    KEGGiswp:swp_3293.
    PATRICi23545040. VBIShePie65056_3033.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000472 Genomic DNA. Translation: ACJ29997.1 .
    RefSeqi YP_002312584.1. NC_011566.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 225849.swp_3293.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACJ29997 ; ACJ29997 ; swp_3293 .
    GeneIDi 7034282.
    KEGGi swp:swp_3293.
    PATRICi 23545040. VBIShePie65056_3033.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi GMMHNLV.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci SPIE225849:GH6V-3214-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
      Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
      PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WP3 / JCM 13877Imported.

    Entry informationi

    Entry nameiB8CRI9_SHEPW
    AccessioniPrimary (citable) accession number: B8CRI9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3