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B8CRI9

- B8CRI9_SHEPW

UniProt

B8CRI9 - B8CRI9_SHEPW

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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

swp_3293

Organism
Shewanella piezotolerans (strain WP3 / JCM 13877)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSPIE225849:GH6V-3214-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:swp_3293Imported
OrganismiShewanella piezotolerans (strain WP3 / JCM 13877)Imported
Taxonomic identifieri225849 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000000753: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi225849.swp_3293.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiGMMHNLV.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

B8CRI9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTPRRATASE EALLRIFTVP EAPDSTLSVI EQNISQNLMG FLQESVVAVE
60 70 80 90 100
KPLTEIELDF QQHQIPAAPQ FVSDYADDMM QTLVAHSVHT SAPSFIGHMT
110 120 130 140 150
SALPYFVLPL SKMMVGLNQN LVKIETSKAF TPLERQVLGM MHHLIYAEND
160 170 180 190 200
DFYQNWMHSA NVSLGAFCSG GTVANITALW TARNQLLKAD GNYRGVAAQG
210 220 230 240 250
VMKGLRHYGY DDLAILVSER GHYSLGKTAD LLGIGRENII QVPTAEDNKV
260 270 280 290 300
DVSKMRKLAN QLAADKIKVM AIVGVAGTTE TGNIDPLNEL ADLASELNCH
310 320 330 340 350
FHVDAAWGGA SLLSEKYRHL LAGIERADSV TIDAHKQMYV PMGAGMVIFK
360 370 380 390 400
DPTFANAIKH HAEYILRKGS KDLGSQTLEG SRPGMAMLVH ACLKVIGRDG
410 420 430 440 450
YEILINNSLE KARYFADLIN QHQDFELVSK PELCLLTYRY VPQKVQIAMA
460 470 480 490 500
NARANNDVDK LSEFNSLLDG LTKFVQKRQR EQGTSFVSRT RINPEKAHLM
510 520 530 540
DIKAVVFRVV LANPLTTPEI LQQVLAEQKV IASQEQRFLP NLLALAER
Length:548
Mass (Da):60,694
Last modified:March 3, 2009 - v1
Checksum:i3D4D1B3D6FC498BD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000472 Genomic DNA. Translation: ACJ29997.1.
RefSeqiYP_002312584.1. NC_011566.1.

Genome annotation databases

EnsemblBacteriaiACJ29997; ACJ29997; swp_3293.
GeneIDi7034282.
KEGGiswp:swp_3293.
PATRICi23545040. VBIShePie65056_3033.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000472 Genomic DNA. Translation: ACJ29997.1 .
RefSeqi YP_002312584.1. NC_011566.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 225849.swp_3293.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACJ29997 ; ACJ29997 ; swp_3293 .
GeneIDi 7034282.
KEGGi swp:swp_3293.
PATRICi 23545040. VBIShePie65056_3033.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi GMMHNLV.
OrthoDBi EOG6MSRZP.

Enzyme and pathway databases

BioCyci SPIE225849:GH6V-3214-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
    Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
    PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WP3 / JCM 13877Imported.

Entry informationi

Entry nameiB8CRI9_SHEPW
AccessioniPrimary (citable) accession number: B8CRI9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: October 1, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3