B8CPU8 (B8CPU8_SHEPW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cystathionine beta-lyase, bacterial EMBL ACJ29811.1
EC=4.4.1.8 EMBL ACJ29811.1

Gene names

Ordered Locus Names:

swp_3096

Organism

Shewanella piezotolerans (strain WP3 / JCM 13877) [Complete proteome] [HAMAP] EMBL ACJ29811.1

Taxonomic identifier

225849 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ACJ29811.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	cystathionine beta-lyase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8CPU8 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 735E40EF3B485227	FASTA	395	43,973
	10 20 30 40 50 60 MKKETQIISL GRDKKWTQGV INPPVYRAST MVFDTMEDLR FAAKNKANGE MFYGRRGGPT 70 80 90 100 110 120 HFAFQAAIAE LEGGVGTALY PSGSAAISNS LLSFLKAGDH LLMVDSAYEP TRDLCNKLLA 130 140 150 160 170 180 GYGIETTYYD PMVGEGIEEL IRPNTKVLFL ESPGSITMEI QDVPTLSRIA HEHDIVVMLD 190 200 210 220 230 240 NTWASPINSR PFEMGVDISI QAATKYIVGH SDVMMGTATA NEKHWEQLRE NSYLLGQCTS 250 260 270 280 290 300 PDDVYLASRG LRTLGIRLAQ HEQNALKVAN WLNSRPEVDH LRHPAFETCP GHEFFKRDFS 310 320 330 340 350 360 ASNGLFSFVL KQGNQKSVTA FVENMQHFKM GFSWGGFESL ILGVFGIDKL RTATKWDSSK 370 380 390 PLIRLHIGLE NVDDLIADLD AAFDRFNAEL KLTAK

References

[1]

"Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3." Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X. PLoS ONE 3:E1937-E1937(2008) [PubMed: 18398463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: WP3 EMBL ACJ29811.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000472 Genomic DNA. Translation: ACJ29811.1.
RefSeq	YP_002312398.1. NC_011566.1.
3D structure databases
ProteinModelPortal	B8CPU8.
ModBase	Search...
Protein-protein interaction databases
STRING	B8CPU8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7034096.
GenomeReviews	Gene locus swp_3096 in contig CP000472_GR.
KEGG	swp:swp_3096.
PATRIC	23544646. VBIShePie65056_2839.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG754729.
OMA	VANEAQF.
ProtClustDB	PRK09028.
Family and domain databases
InterPro	IPR000277. Cys/Met-Metab_PyrdxlP-dep_enz. IPR006233. Cys_b_lyase_bac. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K01760.
PANTHER	PTHR11808:SF8. Cys_b_lyase_bac. 1 hit. PTHR11808. Cys_Met_Meta_PP. 1 hit.
Pfam	PF01053. Cys_Met_Meta_PP. 1 hit. [Graphical view]
PIRSF	PIRSF001434. CGS. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01324. Cysta_beta_ly_B. 1 hit.
PROSITE	PS00868. CYS_MET_METAB_PP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8CPU8_SHEPW

Accession

Primary (citable) accession number: B8CPU8

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)