B8CPT7 (B8CPT7_SHEPW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL ACJ29800.1
EC=6.5.1.1 EMBL ACJ29800.1

Gene names

Ordered Locus Names:

swp_3085

Organism

Shewanella piezotolerans (strain WP3 / JCM 13877) [Complete proteome] [HAMAP] EMBL ACJ29800.1

Taxonomic identifier

225849 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella piezotolerans

Protein attributes

Sequence length	297 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACJ29800.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8CPT7 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: DAE204371A216083	FASTA	297	33,978
	10 20 30 40 50 60 MTKVRKRSSN RKLLRFLNWQ FLLFISFISI SANLKASEIS KPPLQLATEF IAESTVQLDD 70 80 90 100 110 120 FLVSEKLDGV RGYWDGSSMR SRSGRKINLP DWFTKGFPDY PVDGELWIGR NQFEQVSAII 130 140 150 160 170 180 RKTHATKAQW QQVRFMVFDL PGETSHFAKR YQKALAELSD ISTHIEVIPQ FSVRDKLTLD 190 200 210 220 230 240 RRLSDIIENN GEGLMLHRKT ALYQVGRTGD IVKLKPFYDA EARVLAHKEG KGKYIGMMGA 250 260 270 280 290 LLVETKQGKQ FSIGSGFSDE DRRNPPKVGS TITFKYYGET QKGTPRFASF LRVRDPI

References

[1]

"Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3." Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X. PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WP3 / JCM 13877.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000472 Genomic DNA. Translation: ACJ29800.1.
3D structure databases
ProteinModelPortal	B8CPT7.
ModBase	Search...
Protein-protein interaction databases
STRING	225849.swp_3085.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACJ29800; ACJ29800; swp_3085.
KEGG	swp:swp_3085.
PATRIC	23544626. VBIShePie65056_2829.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000293070.
KO	K01971.
OMA	VRGYWDG.
ProtClustDB	PRK09125.
Enzyme and pathway databases
BioCyc	SPIE225849:GH6V-3014-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B8CPT7_SHEPW

Accession

Primary (citable) accession number: B8CPT7

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	May 29, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)