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B8CPT7

- B8CPT7_SHEPW

UniProt

B8CPT7 - B8CPT7_SHEPW

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

swp_3085

Organism
Shewanella piezotolerans (strain WP3 / JCM 13877)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSPIE225849:GH6V-3014-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:swp_3085Imported
    OrganismiShewanella piezotolerans (strain WP3 / JCM 13877)Imported
    Taxonomic identifieri225849 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000000753: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi225849.swp_3085.

    Structurei

    3D structure databases

    ProteinModelPortaliB8CPT7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B8CPT7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTKVRKRSSN RKLLRFLNWQ FLLFISFISI SANLKASEIS KPPLQLATEF    50
    IAESTVQLDD FLVSEKLDGV RGYWDGSSMR SRSGRKINLP DWFTKGFPDY 100
    PVDGELWIGR NQFEQVSAII RKTHATKAQW QQVRFMVFDL PGETSHFAKR 150
    YQKALAELSD ISTHIEVIPQ FSVRDKLTLD RRLSDIIENN GEGLMLHRKT 200
    ALYQVGRTGD IVKLKPFYDA EARVLAHKEG KGKYIGMMGA LLVETKQGKQ 250
    FSIGSGFSDE DRRNPPKVGS TITFKYYGET QKGTPRFASF LRVRDPI 297
    Length:297
    Mass (Da):33,978
    Last modified:March 3, 2009 - v1
    Checksum:iDAE204371A216083
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000472 Genomic DNA. Translation: ACJ29800.1.
    RefSeqiYP_002312387.1. NC_011566.1.

    Genome annotation databases

    EnsemblBacteriaiACJ29800; ACJ29800; swp_3085.
    GeneIDi7034085.
    KEGGiswp:swp_3085.
    PATRICi23544626. VBIShePie65056_2829.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000472 Genomic DNA. Translation: ACJ29800.1 .
    RefSeqi YP_002312387.1. NC_011566.1.

    3D structure databases

    ProteinModelPortali B8CPT7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 225849.swp_3085.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACJ29800 ; ACJ29800 ; swp_3085 .
    GeneIDi 7034085.
    KEGGi swp:swp_3085.
    PATRICi 23544626. VBIShePie65056_2829.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci SPIE225849:GH6V-3014-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
      Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
      PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WP3 / JCM 13877Imported.

    Entry informationi

    Entry nameiB8CPT7_SHEPW
    AccessioniPrimary (citable) accession number: B8CPT7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3