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Protein
Submitted name:

6-phosphogluconate dehydratase

Gene

swp_2392

Organism
Shewanella piezotolerans (strain WP3 / JCM 13877)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseSAAS annotationImported

Enzyme and pathway databases

BioCyciSPIE225849:GH6V-2343-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
6-phosphogluconate dehydrataseImported (EC:4.2.1.12Imported)
Gene namesi
Ordered Locus Names:swp_2392Imported
OrganismiShewanella piezotolerans (strain WP3 / JCM 13877)Imported
Taxonomic identifieri225849 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000000753 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi225849.swp_2392.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0129.
HOGENOMiHOG000173157.
KOiK01690.
OMAiKVDVRQK.
OrthoDBiEOG61ZTBF.

Family and domain databases

InterProiIPR004786. 6-phosphgluc_deHydtase.
IPR015928. Aconitase/3IPM_dehydase_swvl.
IPR000581. DiOHA_6PGluconate_deHydtase.
IPR020558. DiOHA_6PGluconate_deHydtase_CS.
[Graphical view]
PANTHERiPTHR21000. PTHR21000. 1 hit.
PfamiPF00920. ILVD_EDD. 1 hit.
[Graphical view]
SUPFAMiSSF52016. SSF52016. 1 hit.
TIGRFAMsiTIGR01196. edd. 1 hit.
PROSITEiPS00886. ILVD_EDD_1. 1 hit.
PS00887. ILVD_EDD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8CM78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHTVVQSVTD RIIERSKDSR AKYLAALEDA KNRGVHRSAL SCGNLAHGFA
60 70 80 90 100
ACNPADKSSI KQLTKANIGI VTSFNDMLSA HQPYGEYPDL LKQACNEVGS
110 120 130 140 150
VAQVAGGVPA MCDGVTQGQP GMELSLLSRE VIAMGTAVGL SHNMFDGALL
160 170 180 190 200
LGICDKIVPG LLIGALSFGH LPMLFVPAGP MKSGIPNKEK ARIRQKYAQG
210 220 230 240 250
EVDREALLDA ESKSYHSAGT CTFYGTANSN QLMLEVMGLQ LPGSSFVNPD
260 270 280 290 300
DPLREVLSKT AAKQVCRLTE MGTQYTPIGH IVSEKSIVNG IVALLATGGS
310 320 330 340 350
TNLTMHIVAA ARAAGVIINW DDFSELSDAV PLLARVYPNG HADINHFHAA
360 370 380 390 400
GGMAFLIKEL LDGGLLHEDV ETVAGFGLKR YTQEPQIRDG ELTWVDGQKT
410 420 430 440 450
SLDSEVLTSL NSPFQANGGL KLLKGNLGRA VIKVSAVQEQ HRIVEAPAVV
460 470 480 490 500
IDDQNKLEAI FKAGELDKDC VVVVKGQGPK AIGMPELHKL TPILGTLQDR
510 520 530 540 550
GFKVALLTDG RMSGASGKVP AAIHLTPEAL DGGMIAKIHN GDLVRVNATT
560 570 580 590 600
GELTLLVDEA ELQARMPEKV DLQKTSYGMG RELFGALRAS LSSPETGARS

TSAIDEIY
Length:608
Mass (Da):64,639
Last modified:March 3, 2009 - v1
Checksum:i96CB43DC52590779
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000472 Genomic DNA. Translation: ACJ29135.1.
RefSeqiWP_020912495.1. NC_011566.1.

Genome annotation databases

EnsemblBacteriaiACJ29135; ACJ29135; swp_2392.
KEGGiswp:swp_2392.
PATRICi23543326. VBIShePie65056_2196.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000472 Genomic DNA. Translation: ACJ29135.1.
RefSeqiWP_020912495.1. NC_011566.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi225849.swp_2392.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACJ29135; ACJ29135; swp_2392.
KEGGiswp:swp_2392.
PATRICi23543326. VBIShePie65056_2196.

Phylogenomic databases

eggNOGiCOG0129.
HOGENOMiHOG000173157.
KOiK01690.
OMAiKVDVRQK.
OrthoDBiEOG61ZTBF.

Enzyme and pathway databases

BioCyciSPIE225849:GH6V-2343-MONOMER.

Family and domain databases

InterProiIPR004786. 6-phosphgluc_deHydtase.
IPR015928. Aconitase/3IPM_dehydase_swvl.
IPR000581. DiOHA_6PGluconate_deHydtase.
IPR020558. DiOHA_6PGluconate_deHydtase_CS.
[Graphical view]
PANTHERiPTHR21000. PTHR21000. 1 hit.
PfamiPF00920. ILVD_EDD. 1 hit.
[Graphical view]
SUPFAMiSSF52016. SSF52016. 1 hit.
TIGRFAMsiTIGR01196. edd. 1 hit.
PROSITEiPS00886. ILVD_EDD_1. 1 hit.
PS00887. ILVD_EDD_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
    Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
    PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WP3 / JCM 13877Imported.

Entry informationi

Entry nameiB8CM78_SHEPW
AccessioniPrimary (citable) accession number: B8CM78
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: July 22, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.