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B8CK71 (B8CK71_SHEPW) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
4-aminobutyrate aminotransferase EMBL ACJ27774.1
EC=2.6.1.19 EMBL ACJ27774.1
EC=2.6.1.22 EMBL ACJ27774.1
EC=2.6.1.9 EMBL ACJ27774.1
Gene names
Ordered Locus Names:swp_0970
OrganismShewanella piezotolerans (strain WP3 / JCM 13877) [Complete proteome] [HAMAP] EMBL ACJ27774.1
Taxonomic identifier225849 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella ›

Protein attributes

Sequence length426 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Sequences

Sequence LengthMass (Da)Tools
B8CK71 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 24E00B6877181624

FASTA42645,639
        10         20         30         40         50         60 
MTNISLQERK VKVIARGQGN VYPVYVDRAD NAELWDVDGN RYIDFGTGIA VCNTGHSHPK 

        70         80         90        100        110        120 
VVAAVKEQLD KFSHSCVMVN PYESAVELAE KLTELAPGDS DKKAIFVTTG AEAVENCVKI 

       130        140        150        160        170        180 
ARAHTGRRGV IAFNGGFHGR TNLTMALTGK ISPYKHLFGP FPGDIYHAPF PTELHHVSVK 

       190        200        210        220        230        240 
ASLKALENLF KVDIAPTDVA AIIVEPVQGE GGFYAAPAEL LQALRALCDT HGIVLIADEI 

       250        260        270        280        290        300 
QTGFGRTGKM FSFEHAEVEP DLITMAKGIA GGFPIAAVVG KSDIMDAPLP GGLGGTYGGS 

       310        320        330        340        350        360 
PVGCVAALAV LEVIEEQGLV KRADQIGQIF NEQLSLLQSR YPKVIAEVRN QGAMIAIELV 

       370        380        390        400        410        420 
CDGDNEQPNT KLTQAIIAKA AEHGLILLAC GFYGNVIRFL PALTIADELI YEGLDKFTQL 


FAELTD

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References

[1]"Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WP3 / JCM 13877.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000472 Genomic DNA. Translation: ACJ27774.1.
RefSeqYP_002310361.1. NC_011566.1.

3D structure databases

ProteinModelPortalB8CK71.
ModBaseSearch...

Protein-protein interaction databases

STRING225849.swp_0970.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACJ27774; ACJ27774; swp_0970.
GeneID7032059.
KEGGswp:swp_0970.
PATRIC23540588. VBIShePie65056_0880.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMAVEFNDRT.
ProtClustDBCLSK938270.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8CK71_SHEPW
AccessionPrimary (citable) accession number: B8CK71
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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