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B8CK71

- B8CK71_SHEPW

UniProt

B8CK71 - B8CK71_SHEPW

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

swp_0970

Organism
Shewanella piezotolerans (strain WP3 / JCM 13877)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. (S)-3-amino-2-methylpropionate transaminase activity Source: UniProtKB-EC
    2. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
    3. histidinol-phosphate transaminase activity Source: UniProtKB-EC
    4. L-phenylalanine:2-oxoglutarate aminotransferase activity Source: UniProtKB-EC
    5. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSPIE225849:GH6V-935-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported, EC:2.6.1.22Imported, EC:2.6.1.9Imported)
    Gene namesi
    Ordered Locus Names:swp_0970Imported
    OrganismiShewanella piezotolerans (strain WP3 / JCM 13877)Imported
    Taxonomic identifieri225849 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000000753: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi225849.swp_0970.

    Structurei

    3D structure databases

    ProteinModelPortaliB8CK71.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK07250.
    OMAiNSFTHTA.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B8CK71-1 [UniParc]FASTAAdd to Basket

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    MTNISLQERK VKVIARGQGN VYPVYVDRAD NAELWDVDGN RYIDFGTGIA    50
    VCNTGHSHPK VVAAVKEQLD KFSHSCVMVN PYESAVELAE KLTELAPGDS 100
    DKKAIFVTTG AEAVENCVKI ARAHTGRRGV IAFNGGFHGR TNLTMALTGK 150
    ISPYKHLFGP FPGDIYHAPF PTELHHVSVK ASLKALENLF KVDIAPTDVA 200
    AIIVEPVQGE GGFYAAPAEL LQALRALCDT HGIVLIADEI QTGFGRTGKM 250
    FSFEHAEVEP DLITMAKGIA GGFPIAAVVG KSDIMDAPLP GGLGGTYGGS 300
    PVGCVAALAV LEVIEEQGLV KRADQIGQIF NEQLSLLQSR YPKVIAEVRN 350
    QGAMIAIELV CDGDNEQPNT KLTQAIIAKA AEHGLILLAC GFYGNVIRFL 400
    PALTIADELI YEGLDKFTQL FAELTD 426
    Length:426
    Mass (Da):45,639
    Last modified:March 3, 2009 - v1
    Checksum:i24E00B6877181624
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000472 Genomic DNA. Translation: ACJ27774.1.
    RefSeqiYP_002310361.1. NC_011566.1.

    Genome annotation databases

    EnsemblBacteriaiACJ27774; ACJ27774; swp_0970.
    GeneIDi7032059.
    KEGGiswp:swp_0970.
    PATRICi23540588. VBIShePie65056_0880.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000472 Genomic DNA. Translation: ACJ27774.1 .
    RefSeqi YP_002310361.1. NC_011566.1.

    3D structure databases

    ProteinModelPortali B8CK71.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 225849.swp_0970.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACJ27774 ; ACJ27774 ; swp_0970 .
    GeneIDi 7032059.
    KEGGi swp:swp_0970.
    PATRICi 23540588. VBIShePie65056_0880.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K07250.
    OMAi NSFTHTA.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci SPIE225849:GH6V-935-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
      Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
      PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WP3 / JCM 13877Imported.

    Entry informationi

    Entry nameiB8CK71_SHEPW
    AccessioniPrimary (citable) accession number: B8CK71
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3