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B8CK71

- B8CK71_SHEPW

UniProt

B8CK71 - B8CK71_SHEPW

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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

swp_0970

Organism
Shewanella piezotolerans (strain WP3 / JCM 13877)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. (S)-3-amino-2-methylpropionate transaminase activity Source: UniProtKB-EC
  2. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  3. histidinol-phosphate transaminase activity Source: UniProtKB-EC
  4. L-phenylalanine:2-oxoglutarate aminotransferase activity Source: UniProtKB-EC
  5. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSPIE225849:GH6V-935-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported, EC:2.6.1.22Imported, EC:2.6.1.9Imported)
Gene namesi
Ordered Locus Names:swp_0970Imported
OrganismiShewanella piezotolerans (strain WP3 / JCM 13877)Imported
Taxonomic identifieri225849 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000000753: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi225849.swp_0970.

Structurei

3D structure databases

ProteinModelPortaliB8CK71.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiNSFTHTA.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8CK71-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTNISLQERK VKVIARGQGN VYPVYVDRAD NAELWDVDGN RYIDFGTGIA
60 70 80 90 100
VCNTGHSHPK VVAAVKEQLD KFSHSCVMVN PYESAVELAE KLTELAPGDS
110 120 130 140 150
DKKAIFVTTG AEAVENCVKI ARAHTGRRGV IAFNGGFHGR TNLTMALTGK
160 170 180 190 200
ISPYKHLFGP FPGDIYHAPF PTELHHVSVK ASLKALENLF KVDIAPTDVA
210 220 230 240 250
AIIVEPVQGE GGFYAAPAEL LQALRALCDT HGIVLIADEI QTGFGRTGKM
260 270 280 290 300
FSFEHAEVEP DLITMAKGIA GGFPIAAVVG KSDIMDAPLP GGLGGTYGGS
310 320 330 340 350
PVGCVAALAV LEVIEEQGLV KRADQIGQIF NEQLSLLQSR YPKVIAEVRN
360 370 380 390 400
QGAMIAIELV CDGDNEQPNT KLTQAIIAKA AEHGLILLAC GFYGNVIRFL
410 420
PALTIADELI YEGLDKFTQL FAELTD
Length:426
Mass (Da):45,639
Last modified:March 3, 2009 - v1
Checksum:i24E00B6877181624
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000472 Genomic DNA. Translation: ACJ27774.1.
RefSeqiYP_002310361.1. NC_011566.1.

Genome annotation databases

EnsemblBacteriaiACJ27774; ACJ27774; swp_0970.
GeneIDi7032059.
KEGGiswp:swp_0970.
PATRICi23540588. VBIShePie65056_0880.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000472 Genomic DNA. Translation: ACJ27774.1 .
RefSeqi YP_002310361.1. NC_011566.1.

3D structure databases

ProteinModelPortali B8CK71.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 225849.swp_0970.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACJ27774 ; ACJ27774 ; swp_0970 .
GeneIDi 7032059.
KEGGi swp:swp_0970.
PATRICi 23540588. VBIShePie65056_0880.

Phylogenomic databases

eggNOGi COG0160.
HOGENOMi HOG000020206.
KOi K07250.
OMAi NSFTHTA.
OrthoDBi EOG6QVRHN.

Enzyme and pathway databases

BioCyci SPIE225849:GH6V-935-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
PANTHERi PTHR11986. PTHR11986. 1 hit.
Pfami PF00202. Aminotran_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
    Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
    PLoS ONE 3:E1937-E1937(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WP3 / JCM 13877Imported.

Entry informationi

Entry nameiB8CK71_SHEPW
AccessioniPrimary (citable) accession number: B8CK71
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: October 1, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3