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B8CHD3 (B8CHD3_SHEPW) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length506 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B8CHD3 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 8CF202530E2C233A

FASTA50655,322
        10         20         30         40         50         60 
MIYSKPGTAD AVINFKSQYQ NFIGGEWVKP ANGRYFDNPS PVDGQVFCQI PRSDASDIEL 

        70         80         90        100        110        120 
ALNAAHQAKE SWGKTSVTER SNILLRIADR IEQNIEALAI AETWDNGKAV RETLAADLPL 

       130        140        150        160        170        180 
VVDHFRYFAG CIRAQEGSAA DIDANTVSYH FPEPLGVVGQ IIPWNFPILM AAWKVAPALA 

       190        200        210        220        230        240 
AGNCIVLKPA EQTPASILVM LELIEDLLPK GVLNVVNGFG SEAGQALATS SRIAKLAFTG 

       250        260        270        280        290        300 
STEIGHHILK CAAESLIPST VELGGKSPNV YFADVMDHED EYLDKAVEGM LLAFFNQGEV 

       310        320        330        340        350        360 
CTCPSRVLIQ ESIYDKFIAK VIERSKTIKQ SNPLDTETQV GAQASKEQFD KILSYLQIGK 

       370        380        390        400        410        420 
NEGAEVLVGG DSCQLEGEHG EGFYIRPTIL KGTNDMRVFQ EEIFGPVISV TTFKDEAEAL 

       430        440        450        460        470        480 
AIANDTEYGL GAGVWTRDMN TAQRMGRGIQ AGRVWINCYH AYPAHAAFGG YKKSGIGRET 

       490        500 
HKMMLDHYQN TKNLLVSYDA NPLGFF 

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References

[1]"Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3."
Wang F., Wang J., Jian H., Zhang B., Li S., Wang F., Zeng X., Gao L., Bartlett D.H., Yu J., Hu S., Xiao X.
PLoS ONE 3:E1937-E1937(2008) [PubMed: 18398463] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: WP3 EMBL ACJ27059.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000472 Genomic DNA. Translation: ACJ27059.1.
RefSeqYP_002309646.1. NC_011566.1.

3D structure databases

ProteinModelPortalB8CHD3.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8CHD3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7031344.
GenomeReviewsGene locus swp_0216 in contig CP000472_GR.
KEGGswp:swp_0216.
PATRIC23539224. VBIShePie65056_0206.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG752218.
OMAFIDKAAE.
ProtClustDBCLSK907668.

Family and domain databases

InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
Gene3DG3DSA:3.40.309.10. Aldehyde_dehydrogenase_C. 1 hit.
G3DSA:3.40.605.10. Aldehyde_dehydrogenase_N. 1 hit.
KOK00128.
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. Aldehyde_DH/Histidinol_DH. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8CHD3_SHEPW
AccessionPrimary (citable) accession number: B8CHD3
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)