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B8CCT7

- B8CCT7_THAPS

UniProt

B8CCT7 - B8CCT7_THAPS

Protein
Submitted name:

Succinate dehydrogenase flavoprotein subunit

Gene

THAPSDRAFT_42475

Organism
Thalassiosira pseudonana (Marine diatom) (Cyclotella nana)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. flavin adenine dinucleotide binding Source: InterPro
    2. succinate dehydrogenase (ubiquinone) activity Source: UniProtKB-EC

    GO - Biological processi

    1. electron transport chain Source: InterPro
    2. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Succinate dehydrogenase flavoprotein subunitImported (EC:1.3.5.1Imported)
    Gene namesi
    ORF Names:THAPSDRAFT_42475Imported
    OrganismiThalassiosira pseudonana (Marine diatom) (Cyclotella nana)Imported
    Taxonomic identifieri35128 [NCBI]
    Taxonomic lineageiEukaryotaStramenopilesBacillariophytaCoscinodiscophyceaeThalassiosirophycidaeThalassiosiralesThalassiosiraceaeThalassiosira
    ProteomesiUP000001449: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi35128.JGI42475.

    Structurei

    3D structure databases

    ProteinModelPortaliB8CCT7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1053.
    HOGENOMiHOG000160475.
    KOiK00234.

    Family and domain databases

    Gene3Di1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProiIPR003953. FAD_bind_dom.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B8CCT7-1 [UniParc]FASTAAdd to Basket

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    MLSAFARRAS SKATKLASTA PTPTTAVRSL STSTTGDYTI VDHTYDALVI    50
    GAGGSGLRAA MGLSEAGFKT ACVSKLFPTR SHTVAAQGGI NAALGNMGPD 100
    DWRWHMYDTV KGSDWLGDQD AIHYMCREAP KAVLELEEFG LPFSRTEEGK 150
    IYQRAFGGQS LDFGKGGQAH RCCAAADRTG HAMLHTLYGR SLAFDTTYFI 200
    EYFAMDLLMT PDGQCVGAMA LNMEDGTLHR IKAKNTVLAT GGYGRTYFSC 250
    TSAHTCTGDG NAMAMRAGLA NQDAEFVQFH PTGIYGAGCL ITEGCRGEGG 300
    ILRNSEGERF MERYAPSAKD LASRDVVSRA MTMEIREGRG VGPKKDHCYL 350
    HLDHLPAELL AERLPGISET AAIFAGVDVT KEPIPVLPTV HYNMGGIPTN 400
    HLGEVIRTDF NADGSFNSDV VVPGLFAAGE AACASVHGAN RLGANSLLDI 450
    VVFGRACANR IAEIAKPGDA IADAPADVGM DSVAELDKLR FATGSTPTSV 500
    IRGEMQHLMQ DKAAVYRTEE LLAEGKKEID EVVQSFNDVH VTDKSLIWNT 550
    DLVETLELRN LLGCAATTMH SAENRKESRG AHAHENYPDR LDDEWMKHTL 600
    AYFDEKEGKT KIGYRPIHYY TLDEEECKTV PPVARVY 637
    Length:637
    Mass (Da):68,963
    Last modified:March 3, 2009 - v1
    Checksum:i3682775D4F77C653
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000649 Genomic DNA. Translation: EED89006.1.
    RefSeqiXP_002293997.1. XM_002293961.1.

    Genome annotation databases

    EnsemblProtistsiThaps42475; Thaps42475; Thaps42475.
    GeneIDi7441832.
    KEGGitps:THAPSDRAFT_42475.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000649 Genomic DNA. Translation: EED89006.1 .
    RefSeqi XP_002293997.1. XM_002293961.1.

    3D structure databases

    ProteinModelPortali B8CCT7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 35128.JGI42475.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi Thaps42475 ; Thaps42475 ; Thaps42475 .
    GeneIDi 7441832.
    KEGGi tps:THAPSDRAFT_42475.

    Phylogenomic databases

    eggNOGi COG1053.
    HOGENOMi HOG000160475.
    KOi K00234.

    Family and domain databases

    Gene3Di 1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProi IPR003953. FAD_bind_dom.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCMP1335Imported.
    2. Cited for: GENOME REANNOTATION.
      Strain: CCMP1335Imported.

    Entry informationi

    Entry nameiB8CCT7_THAPS
    AccessioniPrimary (citable) accession number: B8CCT7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3