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B8CCT7

- B8CCT7_THAPS

UniProt

B8CCT7 - B8CCT7_THAPS

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Protein
Submitted name:

Succinate dehydrogenase flavoprotein subunit

Gene

THAPSDRAFT_42475

Organism
Thalassiosira pseudonana (Marine diatom) (Cyclotella nana)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: InterPro
  2. succinate dehydrogenase (ubiquinone) activity Source: UniProtKB-EC

GO - Biological processi

  1. electron transport chain Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Succinate dehydrogenase flavoprotein subunitImported (EC:1.3.5.1Imported)
Gene namesi
ORF Names:THAPSDRAFT_42475Imported
OrganismiThalassiosira pseudonana (Marine diatom) (Cyclotella nana)Imported
Taxonomic identifieri35128 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesBacillariophytaCoscinodiscophyceaeThalassiosirophycidaeThalassiosiralesThalassiosiraceaeThalassiosira
ProteomesiUP000001449: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi35128.JGI42475.

Structurei

3D structure databases

ProteinModelPortaliB8CCT7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1053.
HOGENOMiHOG000160475.
InParanoidiB8CCT7.
KOiK00234.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8CCT7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLSAFARRAS SKATKLASTA PTPTTAVRSL STSTTGDYTI VDHTYDALVI
60 70 80 90 100
GAGGSGLRAA MGLSEAGFKT ACVSKLFPTR SHTVAAQGGI NAALGNMGPD
110 120 130 140 150
DWRWHMYDTV KGSDWLGDQD AIHYMCREAP KAVLELEEFG LPFSRTEEGK
160 170 180 190 200
IYQRAFGGQS LDFGKGGQAH RCCAAADRTG HAMLHTLYGR SLAFDTTYFI
210 220 230 240 250
EYFAMDLLMT PDGQCVGAMA LNMEDGTLHR IKAKNTVLAT GGYGRTYFSC
260 270 280 290 300
TSAHTCTGDG NAMAMRAGLA NQDAEFVQFH PTGIYGAGCL ITEGCRGEGG
310 320 330 340 350
ILRNSEGERF MERYAPSAKD LASRDVVSRA MTMEIREGRG VGPKKDHCYL
360 370 380 390 400
HLDHLPAELL AERLPGISET AAIFAGVDVT KEPIPVLPTV HYNMGGIPTN
410 420 430 440 450
HLGEVIRTDF NADGSFNSDV VVPGLFAAGE AACASVHGAN RLGANSLLDI
460 470 480 490 500
VVFGRACANR IAEIAKPGDA IADAPADVGM DSVAELDKLR FATGSTPTSV
510 520 530 540 550
IRGEMQHLMQ DKAAVYRTEE LLAEGKKEID EVVQSFNDVH VTDKSLIWNT
560 570 580 590 600
DLVETLELRN LLGCAATTMH SAENRKESRG AHAHENYPDR LDDEWMKHTL
610 620 630
AYFDEKEGKT KIGYRPIHYY TLDEEECKTV PPVARVY
Length:637
Mass (Da):68,963
Last modified:March 3, 2009 - v1
Checksum:i3682775D4F77C653
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000649 Genomic DNA. Translation: EED89006.1.
RefSeqiXP_002293997.1. XM_002293961.1.

Genome annotation databases

EnsemblProtistsiThaps42475; Thaps42475; Thaps42475.
GeneIDi7441832.
KEGGitps:THAPSDRAFT_42475.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000649 Genomic DNA. Translation: EED89006.1 .
RefSeqi XP_002293997.1. XM_002293961.1.

3D structure databases

ProteinModelPortali B8CCT7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 35128.JGI42475.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi Thaps42475 ; Thaps42475 ; Thaps42475 .
GeneIDi 7441832.
KEGGi tps:THAPSDRAFT_42475.

Phylogenomic databases

eggNOGi COG1053.
HOGENOMi HOG000160475.
InParanoidi B8CCT7.
KOi K00234.

Family and domain databases

Gene3Di 1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProi IPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view ]
SUPFAMi SSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCMP1335Imported.
  2. Cited for: GENOME REANNOTATION.
    Strain: CCMP1335Imported.

Entry informationi

Entry nameiB8CCT7_THAPS
AccessioniPrimary (citable) accession number: B8CCT7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: October 29, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3