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B8CBX3

- B8CBX3_THAPS

UniProt

B8CBX3 - B8CBX3_THAPS

Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

THAPSDRAFT_269718

Organism
Thalassiosira pseudonana (Marine diatom) (Cyclotella nana)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
    Gene namesi
    ORF Names:THAPSDRAFT_269718Imported
    OrganismiThalassiosira pseudonana (Marine diatom) (Cyclotella nana)Imported
    Taxonomic identifieri35128 [NCBI]
    Taxonomic lineageiEukaryotaStramenopilesBacillariophytaCoscinodiscophyceaeThalassiosirophycidaeThalassiosiralesThalassiosiraceaeThalassiosira
    ProteomesiUP000001449: Unassembled WGS sequence

    PTM / Processingi

    Proteomic databases

    PRIDEiB8CBX3.

    Interactioni

    Protein-protein interaction databases

    STRINGi35128.JGI269718.

    Structurei

    3D structure databases

    ProteinModelPortaliB8CBX3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0567.
    HOGENOMiHOG000259586.
    KOiK00164.

    Family and domain databases

    Gene3Di3.40.50.970. 3 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 3 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B8CBX3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRLSHGSGRH SSSNYISHHG NNSSIIRHLS THPSKNDSFL SASSSLYIES     50
    MLERYEQDPD SVPESWRTYF EMGAADASTS SSGEEAMFNQ PTIVLSTHLI 100
    RAYQVNGHRS ANLDPLGLHT NESFPSHDGF AATLNVGFHG FDPNKDMDRE 150
    LNFKGVHTGG NKGFLEDLTS MPGKVTLRKV LDRLRQTYCG TIGVEYMHIG 200
    STEQCNWIRE RVEHPSFLQC DREKKIHIYE RLCFADTFEN YMAHKFNTTK 250
    RFGLDGGEAI VPALKDAIDR ASELGAHSFI IGMPHRGRLN VLANVMRKPM 300
    TTIFSEFQGT HYEMGYYTKM KEDWGSSGDV KYHLGSSMDR TYPDGRKIHL 350
    SLVANPSHLE CVNPVVLGKA RAKQFYCGDS DEDMRNVVPI LLHGDAAFAG 400
    QGVVYETMQM MGVDDFKVGG TLHVIVNNQI GFTTNPINSR STPYASDLGK 450
    AFNCPIFHCN GDDPVAVSRA LETAVEWRHE WGTDVVIDMI CYRRNGHNEL 500
    DQPMFTQPKL YKAITRHPST LEIFEKKLIE EGTMSKEEVE EIRAFTLQSY 550
    ETDYEASKTY KPKPEDWLSS KWSGFKSPRQ HSRIRPTGVD IDTLRYIGNK 600
    AGEVPEGFKI HRQMNKIFKA RQTMAQEGTE IDWGLAEAMA FGSLLLEGNH 650
    VRLTGQDVQR GTFSHRHAVV KDQDTEEEYT PLNSLARILS MSAPLEELRL 700
    PDTQAKLTVR NSILSEFAVL GFEHGYSLEN PNALVLWEAQ FGDFVNGAQV 750
    MLDQFIAAGE DKWLRQSGLV MLLPHGYDGQ GAEHSSCRVE RYLQMVEEDP 800
    HHIPPMGKDE RNQIQKVNWQ IVNCTTPANY FHCLRRQIHR DFRKPLIVVA 850
    PKNLLRNKRC VSSLDDMGPG TIFHRTFDET DEVIKNNPEN VKTLVFCTGQ 900
    IYYELVGERE KLGRHDVAIV RLEQIAPFAF DKVALYCSKY GNAEVIWAQQ 950
    EPKNMGAYSY VLPRLMTATR EINNNEKRAR YVGRLVSSAP ATGMSKIHLK 1000
    EYRDIMEGVF GEASE 1015
    Length:1,015
    Mass (Da):114,945
    Last modified:March 3, 2009 - v1
    Checksum:i3A7C94E0152488DB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000648 Genomic DNA. Translation: EED89203.1.
    RefSeqiXP_002293467.1. XM_002293431.1.

    Genome annotation databases

    EnsemblProtistsiThaps269718; Thaps269718; Thaps269718.
    GeneIDi7450803.
    KEGGitps:THAPSDRAFT_269718.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000648 Genomic DNA. Translation: EED89203.1 .
    RefSeqi XP_002293467.1. XM_002293431.1.

    3D structure databases

    ProteinModelPortali B8CBX3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 35128.JGI269718.

    Proteomic databases

    PRIDEi B8CBX3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi Thaps269718 ; Thaps269718 ; Thaps269718 .
    GeneIDi 7450803.
    KEGGi tps:THAPSDRAFT_269718.

    Phylogenomic databases

    eggNOGi COG0567.
    HOGENOMi HOG000259586.
    KOi K00164.

    Family and domain databases

    Gene3Di 3.40.50.970. 3 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 3 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCMP1335Imported.
    2. Cited for: GENOME REANNOTATION.
      Strain: CCMP1335Imported.

    Entry informationi

    Entry nameiB8CBX3_THAPS
    AccessioniPrimary (citable) accession number: B8CBX3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3