B8BZZ2 (B8BZZ2_THAPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EED93431.1

Gene names

ORF Names:

THAPSDRAFT_17735 EMBL EED93431.1

Organism

Thalassiosira pseudonana (Marine diatom) (Cyclotella nana) [Reference proteome]

Taxonomic identifier

35128 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Stramenopiles › Bacillariophyta › Coscinodiscophyceae › Thalassiosirophycidae › Thalassiosirales › Thalassiosiraceae › Thalassiosira

Protein attributes

Sequence length	221 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	glycolysis Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphoglycerate mutase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EED93431.1
	Non-terminal residue	221	1	EMBL EED93431.1

Sequences

	Sequence		Length	Mass (Da)
	B8BZZ2 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 48BE2C40F01F8D7F	FASTA	221	25,827
	10 20 30 40 50 60 YNLCFVRHGQ STWNRDNRFI GWTDTPLTED GVLEARVAGR MLRSSGMLFD EAHTSLLRRS 70 80 90 100 110 120 IRTTNLVLME MGQEYIPVQK HWRLNERSYG DLVGLNKKEI VKKFGKEQVL RWRRSYDEPP 130 140 150 160 170 180 PPMNEDHDHH PKRDPRYRLM LDEIPSSESL KCTKARSKIY WDDVIAPSLR SGKTVLIVGH 190 200 210 220 ENNLRSLIMR LEGILPDDII NLNLPRAVPL AYRLDKDLKP L

References

[1]

"The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism." Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D., Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A., Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C., Glavina T., Goodstein D. , Hadi M.Z., Hellsten U., Hildebrand M., Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W., Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M., Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A., Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A., Wilkerson F.P., Rokhsar D.S. Science 306:79-86(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCMP1335 EMBL EED93431.1.

[2]

"The Phaeodactylum genome reveals the evolutionary history of diatom genomes." Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V. Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCMP1335 EMBL EED93431.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000641 Genomic DNA. Translation: EED93431.1.
RefSeq	XP_002289894.1. XM_002289858.1.
3D structure databases
ProteinModelPortal	B8BZZ2.
ModBase	Search...
Protein-protein interaction databases
STRING	35128.JGI17735.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	Thaps17735; Thaps17735; Thaps17735.
GeneID	7443718.
KEGG	tps:THAPSDRAFT_17735.
Phylogenomic databases
eggNOG	COG0588.
HOGENOM	HOG000221682.
KO	K01834.
Family and domain databases
HAMAP	MF_01039. PGAM_GpmA.
InterPro	IPR013078. His_Pase_superF_clade-1. IPR005952. Phosphogly_mut1. [Graphical view]
PANTHER	PTHR11931. PTHR11931. 1 hit.
Pfam	PF00300. His_Phos_1. 1 hit. [Graphical view]
SMART	SM00855. PGAM. 1 hit. [Graphical view]
TIGRFAMs	TIGR01258. pgm_1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B8BZZ2_THAPS

Accession

Primary (citable) accession number: B8BZZ2

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	April 3, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)