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B8BRU8 (B8BRU8_THAPS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:THAPSDRAFT_1754 EMBL EED96605.1
OrganismThalassiosira pseudonana (Marine diatom) (Cyclotella nana) [Reference proteome]
Taxonomic identifier35128 [NCBI]
Taxonomic lineageEukaryotaStramenopilesBacillariophytaCoscinodiscophyceaeThalassiosirophycidaeThalassiosiralesThalassiosiraceaeThalassiosira

Protein attributes

Sequence length557 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B8BRU8 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 21C15A3DCE5EC2F3

FASTA55762,489
        10         20         30         40         50         60 
MMPKPTTSYH LYHKFFLYSF ALLSAEAFAP SSTALPLQLQ TTSSASSSPS PAASSTAVFS 

        70         80         90        100        110        120 
FNPLKSFFSS ASQKGMMTST SSQQAEQLQS LTASKLASLG MSSSWDEIRS MLESKQTDDE 

       130        140        150        160        170        180 
RNFRKNLTKG YGKASPLHKL RLFDESNREE DVKVTLYRDS ASWCPYCQKV WMTLEQKRIP 

       190        200        210        220        230        240 
YRVEKINMRC YGDKPMSFMA MQPSGNIPVA VINGVTYNQS NDIMYALEEQ FPDHEPLVPD 

       250        260        270        280        290        300 
ATDSSKRMFA QELLRLERQI FSAWMYWLTS RDGSDGRLRE NFISTLMEVE RALTSMKGPF 

       310        320        330        340        350        360 
FLGDKVSIVD MMFAPFLERM CASLLYFKGF QMRVASGKQS NYPAVNRWFG AMETLESYQL 

       370        380        390        400        410        420 
TKSDYYTHCW DLPPQLGGCV PEAGSEPFQN AINGLTQGSW ELPLSPHNGG IEPDWEWAGD 

       430        440        450        460        470        480 
DNASKREAVE RVSANWEAIV AFAARGAGKA GFPRYGAPLA DPNAITNDAV HPFVSVALQL 

       490        500        510        520        530        540 
LCQKLLADDD ADAKCDKAMK EIAYLWKKEG GEEVIEKVVM SLEYLRDRTG VPRDMRLPAA 

       550 
RQLRAHLNWA ARVLSSA 

« Hide

References

[1]"The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism."
Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D., Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A., Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C., Glavina T., Goodstein D. expand/collapse author list , Hadi M.Z., Hellsten U., Hildebrand M., Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W., Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M., Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A., Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A., Wilkerson F.P., Rokhsar D.S.
Science 306:79-86(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCMP1335 EMBL EED96605.1.
[2]"The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. expand/collapse author list , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCMP1335 EMBL EED96605.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000638 Genomic DNA. Translation: EED96605.1.
RefSeqXP_002286964.1. XM_002286928.1.

3D structure databases

ProteinModelPortalB8BRU8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING35128.JGI1754.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsThaps1754; Thaps1754; Thaps1754.
GeneID7447618.
KEGGtps:THAPSDRAFT_1754.

Phylogenomic databases

eggNOGCOG0625.
HOGENOMHOG000232662.
KOK00799.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8BRU8_THAPS
AccessionPrimary (citable) accession number: B8BRU8
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: July 9, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)