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Protein

Transcription factor MYBS2

Gene

MYBS2

Organism
Oryza sativa subsp. indica (Rice)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Transcription activator that binds to 5'-TATCCA-3' elements in gene promoters. Derepress weakly the sugar-repressed transcription of promoters containing SRS. Contributes to the sugar-repressed transcription of promoters containing 5'-TATCCA-3' elements.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi121 – 145H-T-H motifPROSITE-ProRule annotationAdd BLAST25

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor MYBS2By similarity
Alternative name(s):
Myb-related protein S2By similarity
Short name:
OsMYBS2By similarity
Gene namesi
Name:MYBS2By similarity
ORF Names:OsI_34656Imported
OrganismiOryza sativa subsp. indica (Rice)
Taxonomic identifieri39946 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000007015 Componenti: Chromosome 10

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004391761 – 265Transcription factor MYBS2Add BLAST265

PTM databases

iPTMnetiB8BI93.

Expressioni

Gene expression databases

ExpressionAtlasiB8BI93. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi39946.BGIOSGA031397-PA.

Structurei

3D structure databases

ProteinModelPortaliB8BI93.
SMRiB8BI93.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini93 – 149HTH myb-typePROSITE-ProRule annotationAdd BLAST57

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi71 – 78Nuclear localization signalPROSITE-ProRule annotation8

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi34 – 43Poly-GluSequence analysis10

Phylogenomic databases

eggNOGiKOG0724. Eukaryota.
COG5269. LUCA.
HOGENOMiHOG000070776.
OMAiPVMFRLF.
OrthoDBiEOG09360MLI.

Family and domain databases

CDDicd00167. SANT. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR017930. Myb_dom.
IPR006447. Myb_dom_plants.
IPR001005. SANT/Myb.
PfamiView protein in Pfam
PF00249. Myb_DNA-binding. 1 hit.
SMARTiView protein in SMART
SM00717. SANT. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
TIGRFAMsiTIGR01557. myb_SHAQKYF. 1 hit.
PROSITEiView protein in PROSITE
PS51294. HTH_MYB. 1 hit.

Sequencei

Sequence statusi: Complete.

B8BI93-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQHEEAAER KPSPPVIFRL FGVEVRGGGG GVDEEEYEEE EVEGGLFIKK
60 70 80 90 100
SSSMPNLTSI DPLPVPADGG KRRASDDSEL ASGQQKRRRR KVQERKKGVP
110 120 130 140 150
WTEEEHKKFL EGLRQLGKGD WRGISKNFVT SRTATQVASH AQKYFLRQTN
160 170 180 190 200
PGKKKRRASL FDVVAECSDD QLPSPQSVGT KPPTQDIIHT DRGDVPILSY
210 220 230 240 250
PVARGFRGDS VQVDELTEYV KRLKAAEDMS LSMISGLEMA SSSISSLELS
260
IAPPHCAIEA AIKVL
Length:265
Mass (Da):29,271
Last modified:March 3, 2009 - v1
Checksum:i74B3F6D6B0DE2BEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000135 Genomic DNA. Translation: EEC67443.1.

Genome annotation databases

EnsemblPlantsiBGIOSGA031397-TA; BGIOSGA031397-PA; BGIOSGA031397.
Os10t0562100-01; Os10t0562100-01; Os10g0562100.
GrameneiBGIOSGA031397-TA; BGIOSGA031397-PA; BGIOSGA031397.
Os10t0562100-01; Os10t0562100-01; Os10g0562100.

Similar proteinsi

Entry informationi

Entry nameiMYBS2_ORYSI
AccessioniPrimary (citable) accession number: B8BI93
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 15, 2017
Last sequence update: March 3, 2009
Last modified: February 28, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome