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B8A0Q6 (B8A0Q6_MAIZE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismZea mays (Maize) EMBL ACL53755.1
Taxonomic identifier4577 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Protein attributes

Sequence length619 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
B8A0Q6 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 8A89F70D0AEDE61C

FASTA61967,970
        10         20         30         40         50         60 
MWRSCVSRGL SRAKASASRL LSTASSSYTV VDHTYDAVVV GAGGAGLRAA IGLSEHGFNT 

        70         80         90        100        110        120 
ACITKLFPTR SHTVAAQGGI NAALGNMSED DWRWHMYDTV KGSDWLGDQD SIQYMCREAP 

       130        140        150        160        170        180 
KAVIELENYG LPFSRTEEGK IYQRAFGGQS LDFGKGGQAY RCACAADRTG HAMLHTLYGQ 

       190        200        210        220        230        240 
AMKHNTQFFV EYFALDLLMD NEGKCQGIIA LNMEDGTLHR FRASNTILAT GGYGRAYFSA 

       250        260        270        280        290        300 
TSAHTCTGDG NAMVARAGLP LQDLEFVQFH PTGIYGAGCL ITEGSRGEGG ILRNSEGERF 

       310        320        330        340        350        360 
MERYAPTAKD LASRDVVSRS MTMEIREGRG VGPLKDHIYL HLNHLPPEVL KERLPGISET 

       370        380        390        400        410        420 
AAIFAGVDVT KEPIPVLPTV HYNMGGIPTN YHGEVVDIKG DNPDAVVPGL MAAGEAACAS 

       430        440        450        460        470        480 
VHGANRLGAN SLLDIVVFGR ACANRVADIS KPGEKQKPLE KDAGEKTIAW LDKLRNANGS 

       490        500        510        520        530        540 
LPTSKIRLNM QRVMQNNAAV FRTQETLEEG CELISKTWES FHDVKLSDQS LIWNSDLIET 

       550        560        570        580        590        600 
LELENLLINA CITMYSAEAR KESRGAHARE DFTTRDDEKW MKHSLGYWEN EKVRLAYRPV 

       610 
HMNTLDDEVE SFPPKARVY 

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References

[1]"Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs."
Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J., Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J., Walbot V., Yu Y.
PLoS Genet. 5:E1000740-E1000740(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B73 EMBL ACL53755.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BT055148 mRNA. Translation: ACL53755.1.
BT069258 mRNA. Translation: ACN36155.1.
BT069259 mRNA. Translation: ACN36156.1.
RefSeqNP_001146352.1. NM_001152880.1.
UniGeneZm.16130.

3D structure databases

ProteinModelPortalB8A0Q6.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB8A0Q6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100279930.
KEGGzma:100279930.

Organism-specific databases

GrameneB8A0Q6.

Phylogenomic databases

KOK00234.
OMARDGPILQ.

Family and domain databases

Gene3D1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8A0Q6_MAIZE
AccessionPrimary (citable) accession number: B8A0Q6
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)