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B7ZNH7

- B7ZNH7_MOUSE

UniProt

B7ZNH7 - B7ZNH7_MOUSE

Protein
Submitted name:

Collagen alpha-1(XIV) chain

Gene

Col14a1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. collagen fibril organization Source: MGI
    2. homeostasis of number of cells within a tissue Source: MGI
    3. regulation of cell growth involved in cardiac muscle cell development Source: MGI
    4. ventricular cardiac muscle tissue development Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Collagen alpha-1(XIV) chainImported
    Submitted name:
    Collagen, type XIV, alpha 1Imported
    Submitted name:
    Procollagen, type XIV, alpha 1, isoform CRA_aImported
    Gene namesi
    Name:Col14a1Imported
    ORF Names:mCG_11867Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 15

    Organism-specific databases

    MGIiMGI:1341272. Col14a1.

    Subcellular locationi

    GO - Cellular componenti

    1. collagen trimer Source: UniProtKB-KW
    2. extracellular space Source: Ensembl
    3. interstitial matrix Source: MGI

    Expressioni

    Gene expression databases

    GenevestigatoriB7ZNH7.

    Family & Domainsi

    Keywords - Domaini

    CollagenImported

    Phylogenomic databases

    GeneTreeiENSGT00740000115118.
    HOGENOMiHOG000015812.
    HOVERGENiHBG051060.
    KOiK08133.

    Family and domain databases

    Gene3Di2.60.40.10. 8 hits.
    3.40.50.410. 2 hits.
    InterProiIPR008160. Collagen.
    IPR008985. ConA-like_lec_gl_sf.
    IPR003961. Fibronectin_type3.
    IPR013783. Ig-like_fold.
    IPR001791. Laminin_G.
    IPR002035. VWF_A.
    [Graphical view]
    PfamiPF01391. Collagen. 5 hits.
    PF00041. fn3. 8 hits.
    PF00092. VWA. 2 hits.
    [Graphical view]
    SMARTiSM00060. FN3. 8 hits.
    SM00210. TSPN. 1 hit.
    SM00327. VWA. 2 hits.
    [Graphical view]
    SUPFAMiSSF49265. SSF49265. 6 hits.
    SSF49899. SSF49899. 1 hit.
    SSF53300. SSF53300. 2 hits.
    PROSITEiPS50853. FN3. 8 hits.
    PS50234. VWFA. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B7ZNH7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMIWQCKMRD WLILAFLAAA CFCTIVRGQV APPTRLRYNV ISHDSIQISW     50
    KAPRGKFGGY KLLVAPASGG KTNQMNLQNT ATKAIIQGLL PEQNYTVQLI 100
    AYYKDKESKP AQGQFRIKDL EKRKDPTKPK VKVVDKGNGS KPTSPEEVKF 150
    FCETPAIADI VILVDGSWSI GRFNFRLVRN FLENLVTAFN VGSEKTRIGL 200
    AQYSGDPRIE WHLNAFNTKD EVIDAVRSLP YKGGNTLTGL ALNFIFENSF 250
    KPEAGSRSGV SKIGILITDG KSQDDIIPPS RNLRESGVEL FAIGVKNADL 300
    SELQEIASEP DSTHVYNVAE FDLMHTVVES LTRTVCSRVE EQDKEIKASA 350
    LATIGPPTEL ITSEVTARSF MVNWTQSPGK VEKYRVVYYP TRGGKPEEVV 400
    VDGSVSSTVL KNLMSSTEYQ IAVFAVSAHT ASEGLRGAET TLALPMASDL 450
    ELYDVTENSM RVRWDAVPGA TGYLILYAPL TEGLAGDEKE MKIGETHTDI 500
    ELSGLFPNTE YTVTVYAMFG EEASDPATGQ ETTLPLTPPR NLRISNVGSN 550
    SARLTWDPAS GKISGYRIVY TSADGTEINE VEVDPITTFP LKGLTPLTEY 600
    SIAIFSIYEE GQSLPLVGEF TTEEVPAQQY LEIDEVKTDS FRVTWHPLSA 650
    EEGQHKLMWI PVYGGKTQEV DLKEEQDSYV IEGLDPGTEY EVSLLAVLDD 700
    GSESEVVTAV GTTLDDFWTE APTAIEPTSP VTSVLQTGIR NLVVDDETAT 750
    SLRVSWDISD SNVEQFRVTY LKAQGDPMEE VVMVPGVQNS LLLKALLPDT 800
    EYKVTVTPVY TVGEGVSVSA PGKTLPSSGP QNLRVSEEWY NRVRITWDPP 850
    SGPVKGYRIV YKPVSVPGQT LETFVGADIN TIVMTNLLSG MDYNVKIFAS 900
    QASGFSDALT GLVQTLFLGV TDLQANQVEM TSLCARWQIH RHATAYRIVL 950
    ESLQDTQAQE STVGGGVNRH CFYGLQPDSE YKISVYTKLQ ELEGPSVSIM 1000
    QKTQSLPTEP PTFPPTIPPA KEVCKAAKAD LVFMVDGSWS IGDDNFNKII 1050
    NFLYSTVGAL DKIGADGTQV AMVQFTDDPR TEFKLDSYKT KETLLDAIRH 1100
    ISYKGGNTKT GKAIKHVRDT LFTSDSGTRR GIPKVIVVIT DGRSQDDVNK 1150
    ISREMQADGF NIFAIGVADA DYSELVQIGS KPSSRHVFFV DDFDAFKKIE 1200
    DELITFVCET ASATCPMVHK DGVDLAGFKM MEMFGLVEKD FSAVEGVSME 1250
    PGTFNLFPCY QIHKDALVSQ PTKYLHPEGL PSDYTMSFLF RILPDTPQEP 1300
    FALWEILNKN SEPLVGIILD NGGKTLTYFN YDYTGDFQTV TFEGPDIRKM 1350
    FYGSFHKLHV VVSKTLAKVV VDCKEVGQKA INASANITSD GVEVLGRMVR 1400
    SRGPNGNSAP FQLQMFDIVC STSWASKDRC CELPGLRDEE SCPDLPRSCS 1450
    CSETNEVALG PAGPPGGPGL RGPKGQQGEQ GPKGPEGPRG ETGPAGPQGP 1500
    PGPQGPSGLS IQGMPGMPGD KGDKGDAGLP GPQGVPGGVG SPGRDGSPGQ 1550
    RGFPGKDGSS GPPGPPGPIG IPGAPGVPGI TGSMGPQGAL GPPGVPGAKG 1600
    ERGERGDLQS QAMVRAVARQ VCEQLIQSHM ARYTAILNQI PSQSSSIRTI 1650
    QGPPGEPGRP GSPGTPGEQG PPGTPGFPGN AGVPGTPGER GLTGVKGEKG 1700
    NPGIGTQGPR GPPGPAGPSG ESRPGSPGPP GSPGPRGPPG HLGVPGPQGP 1750
    SGQPGYCDPS SCSAYGVGVS HPDQPEFTPV QDEQEAMDLW SAGI 1794
    Length:1,794
    Mass (Da):192,755
    Last modified:March 3, 2009 - v1
    Checksum:i745DDA3D24956BD8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC131337 Genomic DNA. No translation available.
    AC133156 Genomic DNA. No translation available.
    BC138345 mRNA. Translation: AAI38346.1.
    BC145244 mRNA. Translation: AAI45245.1.
    CH466545 Genomic DNA. Translation: EDL29272.1.
    RefSeqiNP_851794.3. NM_181277.3.
    UniGeneiMm.297859.

    Genome annotation databases

    EnsembliENSMUST00000110221; ENSMUSP00000105850; ENSMUSG00000022371.
    GeneIDi12818.
    KEGGimmu:12818.
    UCSCiuc007vsc.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC131337 Genomic DNA. No translation available.
    AC133156 Genomic DNA. No translation available.
    BC138345 mRNA. Translation: AAI38346.1 .
    BC145244 mRNA. Translation: AAI45245.1 .
    CH466545 Genomic DNA. Translation: EDL29272.1 .
    RefSeqi NP_851794.3. NM_181277.3.
    UniGenei Mm.297859.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000110221 ; ENSMUSP00000105850 ; ENSMUSG00000022371 .
    GeneIDi 12818.
    KEGGi mmu:12818.
    UCSCi uc007vsc.2. mouse.

    Organism-specific databases

    CTDi 7373.
    MGIi MGI:1341272. Col14a1.

    Phylogenomic databases

    GeneTreei ENSGT00740000115118.
    HOGENOMi HOG000015812.
    HOVERGENi HBG051060.
    KOi K08133.

    Miscellaneous databases

    NextBioi 282286.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori B7ZNH7.

    Family and domain databases

    Gene3Di 2.60.40.10. 8 hits.
    3.40.50.410. 2 hits.
    InterProi IPR008160. Collagen.
    IPR008985. ConA-like_lec_gl_sf.
    IPR003961. Fibronectin_type3.
    IPR013783. Ig-like_fold.
    IPR001791. Laminin_G.
    IPR002035. VWF_A.
    [Graphical view ]
    Pfami PF01391. Collagen. 5 hits.
    PF00041. fn3. 8 hits.
    PF00092. VWA. 2 hits.
    [Graphical view ]
    SMARTi SM00060. FN3. 8 hits.
    SM00210. TSPN. 1 hit.
    SM00327. VWA. 2 hits.
    [Graphical view ]
    SUPFAMi SSF49265. SSF49265. 6 hits.
    SSF49899. SSF49899. 1 hit.
    SSF53300. SSF53300. 2 hits.
    PROSITEi PS50853. FN3. 8 hits.
    PS50234. VWFA. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: BrainImported.
    3. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    5. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiB7ZNH7_MOUSE
    AccessioniPrimary (citable) accession number: B7ZNH7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3