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Protein
Submitted name:

PPARGC1B protein

Gene

PPARGC1B

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
PPARGC1B proteinImported
Gene namesi
Name:PPARGC1BImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134953410

PTM / Processingi

Proteomic databases

PeptideAtlasiB7ZM40
PRIDEiB7ZM40

Expressioni

Gene expression databases

GenevisibleiB7ZM40 HS

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliB7ZM40
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini863 – 928RRMInterPro annotationAdd BLAST66

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili385 – 415Sequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IIJJ Eukaryota
ENOG4111PZ5 LUCA
HOGENOMiHOG000236356
HOVERGENiHBG080730

Family and domain databases

CDDicd12356 RRM_PPARGC1B, 1 hit
Gene3Di3.30.70.3301 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR034605 PGC-1
IPR034621 PGC-1beta
IPR034177 PPARGC1B_RRM
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PANTHERiPTHR15528 PTHR15528, 2 hits
PTHR15528:SF12 PTHR15528:SF12, 2 hits
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

B7ZM40-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGNDCGALL DEELSSFFLN YLADTQGGGS GEEQLYADFP ELDLSQLDAS
60 70 80 90 100
DFDSATCFGE LQWCPENSET EPNQYSPDDS ELFQIDSENE ALLAELTKTL
110 120 130 140 150
DDIPEDDVGL AAFPALDGGD ALSCTSASPA PSSAPPSPAP EKPSAPAPEV
160 170 180 190 200
DELSLADSTQ DKKAPMMQSQ SRSCTELHKH LTSAQCCLQD RGLQPPCLQS
210 220 230 240 250
PRLPAKEDKE PGEDCPSPQP APASPRDSLA LGRADPGAPV SQEDMQAMVQ
260 270 280 290 300
LISYMHTYCL PQRKLPPQTP EPLPKACSNP SQQVRSRPWS RHHSKASWAE
310 320 330 340 350
FSILRELLAQ DVLCDVSKPY RLATPVYASL TPRSRPRPPK DSQASPGRPS
360 370 380 390 400
SVEEVRIAAS PKSTGPRPSL RPLRLEVKRE VRRPARLQQQ EEEDEEEEEE
410 420 430 440 450
EEEEEKEEEE EWGRKRPGRG LPWTKLGRKL ESSVCPVRRS RRLNPELGPW
460 470 480 490 500
LTFADEPLVP SEPQGALPSL CLAPKAYDVE RELGSPTDED SGQDQQLLRG
510 520 530 540 550
PQIPALESPC ESGCGDMDED PSCPQLPPRD SPRCLMLALS QSDPTFGKKS
560 570 580 590 600
FEQTLTVELC GTAGLTPPTT PPYKPTEEDP FKPDIKHSLG KEIALSLPSP
610 620 630 640 650
EGLSLKATPG AAHKLPKKHP ERSELLSHLR HATAQPASQA GQKRPFSCSF
660 670 680 690 700
GDHDYCQVLR PEGVLQRKVL RSWEPSGVHL EDWPQQGAPW AEAQAPGREE
710 720 730 740 750
DRSCDAGAPP KDSTLLRDHE IRASLTKHFG LLETALEEED LASCKSPEYD
760 770 780 790 800
TVFEDSSSSS GESSFLPEEE EEEGEEEEED DEEEDSGVSP TCSDHCPYQS
810 820 830 840 850
PPSKANRQLC SRSRSSSGSS PCHSWSPATR RNFRCESRGP CSDRTPSIRH
860 870 880 890 900
ARKRREKAIG EGRVVYIQNL SSDMSSRELK RRFEVFGEIE ECEVLTRNRR
910 920 930 940 950
GEKYGFITYR CSEHAALSLT KGAALRKRNE PSFQLSYGGL RHFCWPRYTD
960 970 980
YDSNSEEALS ASGKSKYEAM DFDSLLKEAQ QSLH
Length:984
Mass (Da):108,839
Last modified:March 3, 2009 - v1
Checksum:i049352A0FA80FFDD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC144251 mRNA Translation: AAI44252.1
RefSeqiNP_001166169.1, NM_001172698.1
UniGeneiHs.483816

Genome annotation databases

GeneIDi133522

Similar proteinsi

Entry informationi

Entry nameiB7ZM40_HUMAN
AccessioniPrimary (citable) accession number: B7ZM40
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: February 28, 2018
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.