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Protein
Submitted name:

GEMIN5 protein

Gene

GEMIN5

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

SignaLinkiB7ZLC9.

Names & Taxonomyi

Protein namesi
Submitted name:
GEMIN5 proteinImported
Gene namesi
Name:GEMIN5Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiB7ZLC9.
PRIDEiB7ZLC9.

Expressioni

Gene expression databases

GenevisibleiB7ZLC9. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000285873.

Structurei

3D structure databases

ProteinModelPortaliB7ZLC9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini60 – 719660WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatUniRule annotationSAAS annotation, WD repeatSAAS annotation

Phylogenomic databases

eggNOGiENOG410IJDN. Eukaryota.
ENOG410XTH3. LUCA.
HOVERGENiHBG051721.
KOiK13133.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR024977. Apc4_WD40_dom.
IPR020472. G-protein_beta_WD-40_rep.
IPR011047. Quinoprotein_ADH-like_supfam.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12894. ANAPC4_WD40. 2 hits.
PF00400. WD40. 3 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 12 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
SSF50998. SSF50998. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7ZLC9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQEPRTLPP SPNWYCARCS DAVPGGLFGF AARTSVFLVR VGPGAGESPG
60 70 80 90 100
TPPFRVIGEL VGHTERVSGF TFSHHPGQYN LCATSSDDGT VKIWDVETKT
110 120 130 140 150
VVTEHALHQH TISTLHWSPR VKDLIVSGDE KGVVFCYWFN RNDSQHLFIE
160 170 180 190 200
PRTIFCLTCS PHHEDLVAIG YKDGIVVIID ISKKGEVIHR LRGHDDEIHS
210 220 230 240 250
IAWCPLPGED CLSINQEETS EAEITNGNAV AQAPVTKGCY LATGSKDQTI
260 270 280 290 300
RIWSCSRGRG VMILKLPFLK RRGGGIDPTV KERLWLTLHW PSNQPTQLVS
310 320 330 340 350
SCFGGELLQW DLTQSWRRKY TLFSASSEGQ NHSRIVFNLC PLQTEDDKQL
360 370 380 390 400
LLSTSMDRDV KCWDIATLEC SWTLPSLGGF AYSLAFSSVD IGSLAIGVGD
410 420 430 440 450
GMIRVWNTLS IKNNYDVKNF WQGVKSKVTA LCWHPTKEGC LAFGTDDGKV
460 470 480 490 500
GLYDTYSNKP PQISSTYHKK TVYTLAWGPP VPPMSLGGEG DRPSLALYSC
510 520 530 540 550
GGEGIVLQHN PWKLSGEAFD INKLIRDTNS IKYKLPVHTE ISWKADGKIM
560 570 580 590 600
ALGNEDGSIE IFQIPNLKLI CTIQQHHKLV NTISWHHEHG SQPELSYLMA
610 620 630 640 650
SGSNNAVIYV HNLKTVIESS PESPVTITEP YRTLSGHTAK ITSVAWSPHH
660 670 680 690 700
DGRLVSASYD GTAQVWDALR EEPLCNFRGH QGRLLCVAWS PLDPDCIYSG
710 720 730 740 750
ADDFCVHKWL TSMQDHSRPP QGKKSIELEK KRLSQPKAKP KKKKKPTLRT
760 770 780 790 800
PVKLESIDGN EEESMKENSG PVENGVSDQE GEEQAREPEL PCGLAPAVSR
810 820 830 840 850
EPVICTPVSS GFEKSKVTIN NKVILLKKEP PKEKPETLIK KRKARSLLPL
860 870 880 890 900
STSLDHRSKE ELHQDCLVLA TAKHSRELNE DVSADVEERF HLGLFTDRAT
910 920 930 940 950
LYRMIDIEGK GHLENGHPEL FHQLMLWKGD LKGVLQTAAE RGELTDNLVA
960 970 980 990 1000
MAPAAGYHVW LWAVEAFAKQ LCFQDQYVKA ASHLLSIHKV YEAVELLKSN
1010 1020 1030 1040 1050
HFYREAIAIA KARLRPEDPV LKDLYLSWGT VLERDGHYAV AAKCYLGATC
1060 1070 1080 1090 1100
AYDAAKVLAK KGDAASLRTA AELAAIVGED ELSASLALRC AQELLLANNW
1110 1120 1130 1140 1150
VGAQEALQLH ESLQGQRLVF CLLELLSRHL EEKQLSEGKS SSSYHTWNTG
1160 1170 1180 1190 1200
TEGPFVERVT AVWKSIFSLD TPEQYQEAFQ KLQNIKYPSA TNNTPAKQLL
1210 1220 1230 1240 1250
LHICHDLTLA VLSQQMASWD EAVQALLRAV VRSYDSGSFT IMQEVYSAFL
1260 1270 1280 1290 1300
PDGCDHLRDK LGDHQSPATP AFKSLEAFFL YGRLYEFWWS LSRPCPNSSV
1310 1320 1330 1340 1350
WVRAGHRTLS VEPSQQLDTA STEETDPETS QPEPNRPSEL DLRLTEEGER
1360 1370 1380 1390 1400
MLSTFKELFS EKHASLQNSQ RTVAEVQETL AEMIRQHQKS QLCKSTANGP
1410 1420 1430 1440 1450
DKNEPEVEAE QPLCSSQSQC KEEKNEPLSL PELTKRLTEA NQRMAKFPES
1460 1470 1480 1490 1500
IKAWPFPDVL ECCLVLLLIR SHFPGCLAQE MQQQAQELLQ KYGNTKTYRR

HCQTFCM
Length:1,507
Mass (Da):168,432
Last modified:March 3, 2009 - v1
Checksum:iE41812F7CBAE2526
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC143724 mRNA. Translation: AAI43725.1.
RefSeqiNP_001239085.1. NM_001252156.1.
UniGeneiHs.483921.

Genome annotation databases

GeneIDi25929.
KEGGihsa:25929.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC143724 mRNA. Translation: AAI43725.1.
RefSeqiNP_001239085.1. NM_001252156.1.
UniGeneiHs.483921.

3D structure databases

ProteinModelPortaliB7ZLC9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000285873.

Proteomic databases

PaxDbiB7ZLC9.
PRIDEiB7ZLC9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi25929.
KEGGihsa:25929.

Organism-specific databases

CTDi25929.

Phylogenomic databases

eggNOGiENOG410IJDN. Eukaryota.
ENOG410XTH3. LUCA.
HOVERGENiHBG051721.
KOiK13133.

Enzyme and pathway databases

SignaLinkiB7ZLC9.

Miscellaneous databases

ChiTaRSiGEMIN5. human.
GenomeRNAii25929.

Gene expression databases

GenevisibleiB7ZLC9. HS.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR024977. Apc4_WD40_dom.
IPR020472. G-protein_beta_WD-40_rep.
IPR011047. Quinoprotein_ADH-like_supfam.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12894. ANAPC4_WD40. 2 hits.
PF00400. WD40. 3 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 12 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
SSF50998. SSF50998. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: CerebellumImported.

Entry informationi

Entry nameiB7ZLC9_HUMAN
AccessioniPrimary (citable) accession number: B7ZLC9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: June 8, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.