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Protein
Submitted name:

Histone deacetylase 5

Gene

Hdac5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Histone deacetylase 5Imported
Gene namesi
Name:Hdac5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1333784 Hdac5

PTM / Processingi

Proteomic databases

MaxQBiB7ZDF4
PeptideAtlasiB7ZDF4
PRIDEiB7ZDF4

Expressioni

Gene expression databases

BgeeiENSMUSG00000008855
ExpressionAtlasiB7ZDF4 baseline and differential

Structurei

3D structure databases

SMRiB7ZDF4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 114HDAC4_GlnInterPro annotationAdd BLAST89

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili76 – 127Sequence analysisAdd BLAST52

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1343 Eukaryota
COG0123 LUCA
GeneTreeiENSGT00530000062809

Family and domain databases

InterProiView protein in InterPro
IPR024643 Hist_deacetylase_Gln_rich_N
PfamiView protein in Pfam
PF12203 HDAC4_Gln, 1 hit

Sequencei

Sequence statusi: Fragment.

B7ZDF4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSSMGGGGG GSPSPVELRG ALAGPMDPAL REQQLQQELL VLKQQQQLQK
60 70 80 90 100
QLLFAEFQKQ HDHLTRQHEV QLQKHLKQQQ EMLAAKRQQE LEQQRQREQQ
110 120 130 140 150
RQEELEKQRL EQQLLILRNK EKSKESAIAS TEVKLRLQEF LLSKSKEPTP
160 170
GGLNHSLPQH PKCWGAHHAS LDQSS
Length:175
Mass (Da):20,051
Last modified:March 3, 2009 - v1
Checksum:iC24E048B469922B9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei175Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL954730 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000156337; ENSMUSP00000116646; ENSMUSG00000008855

Similar proteinsi

Entry informationi

Entry nameiB7ZDF4_MOUSE
AccessioniPrimary (citable) accession number: B7ZDF4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 23, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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