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Protein
Submitted name:

E3 ubiquitin-protein ligase PDZRN3

Gene

PDZRN3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
E3 ubiquitin-protein ligase PDZRN3Imported
Submitted name:
cDNA, FLJ79174, highly similar to PDZ domain-containing RING finger protein 3Imported
Gene namesi
Name:PDZRN3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

HGNCiHGNC:17704. PDZRN3.

PTM / Processingi

Proteomic databases

PeptideAtlasiB7ZAG0.

Expressioni

Gene expression databases

BgeeiENSG00000121440.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000263666.

Structurei

3D structure databases

SMRiB7ZAG0. Positions 21-56, 121-232.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini136 – 20570PDZ (DHR)InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 PDZ (DHR) domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG0297. Eukaryota.
KOG0312. Eukaryota.
ENOG4111S26. LUCA.
GeneTreeiENSGT00510000046421.
HOVERGENiHBG053554.

Family and domain databases

Gene3Di2.30.42.10. 2 hits.
InterProiIPR001478. PDZ.
[Graphical view]
PfamiPF00595. PDZ. 1 hit.
[Graphical view]
SMARTiSM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 2 hits.
PROSITEiPS50106. PDZ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7ZAG0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGCSLCSLQK QEEQYKLLYE VCQVNGRDLS RATHDQAVEA FKTAKEPIVV
60 70 80 90 100
QVLRRTPRTK MFTPPSESQL VDTGTQTDIT FEHIMALTKM SSPSPPVLDP
110 120 130 140 150
YLLPEEHPSA HEYYDPNDYI GDIHQEMDRE ELELEEVDLY RMNSQDKLGL
160 170 180 190 200
TVCYRTDDED DIGIYISEID PNSIAAKDGR IREGDRIIQI NGIEVQNREE
210 220 230 240 250
AVALLTSEEN KNFSLLIARP ELQLDEGWMD DDRNDFLDDL HMDMLEEQHH
260 270 280 290 300
QAMQFTASVL QQKKHDEDGG TTDTATILSN QHEKDSGVGR TDESTRNDES
310 320 330 340 350
SEQENNGDDA TASSNPLAGQ RKLTCSQDTL GSGDLPFSNE SFISADCTDA
360 370 380 390 400
DYLGIPVDEC ERFRELLELK CQVKSATPYG LYYPSGPLDA GKSDPESVDK
410 420 430 440 450
ELELLNEELR SIELECLSIV RAHKMQQLKE QYRESWMLHN SGFRNYNTSI
460 470 480 490 500
DVRRHELSDI TELPEKSDKD SSSAYNTGES CRSTPLTLEI SPDNSLRRAA
510 520 530 540 550
EGISCPSSEG AVGTTEAYGP ASKNLLSITE DPEVGTPTYS PSLKELDPNQ
560 570 580 590 600
PLESKERRAS DGSRSPTPSQ KLGSAYLPSY HHSPYKHAHI PAHAQHYQSY
610 620 630 640 650
MQLIQQKSAV EYAQSQMSLV SMCKDLSSPT PSEPRMEWKV KIRSDGTRYI
660 670 680 690 700
TKRPVRDRLL RERALKIREE RSGMTTDDDA VSEMKMGRYW SKEERKQHLV
710 720 730 740 750
KAKEQRRRRE FMMQSRLDCL KEQQAADDRK EMNILELSHK KMMKKRNKKI
760 770 780
FDNWMTIQEL LTHGTKSPDG TRVYNSFLSV TTV
Length:783
Mass (Da):89,144
Last modified:March 3, 2009 - v1
Checksum:i2F9F80896E2F2D54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024102 Genomic DNA. No translation available.
AC103560 Genomic DNA. No translation available.
AC117489 Genomic DNA. No translation available.
AC119731 Genomic DNA. No translation available.
AK316275 mRNA. Translation: BAH14646.1.
RefSeqiNP_001290071.1. NM_001303142.1.
UniGeneiHs.660347.
Hs.662049.
Hs.666839.
Hs.743998.

Genome annotation databases

EnsembliENST00000479530; ENSP00000418624; ENSG00000121440.
GeneIDi23024.
UCSCiuc011bgf.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024102 Genomic DNA. No translation available.
AC103560 Genomic DNA. No translation available.
AC117489 Genomic DNA. No translation available.
AC119731 Genomic DNA. No translation available.
AK316275 mRNA. Translation: BAH14646.1.
RefSeqiNP_001290071.1. NM_001303142.1.
UniGeneiHs.660347.
Hs.662049.
Hs.666839.
Hs.743998.

3D structure databases

SMRiB7ZAG0. Positions 21-56, 121-232.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000263666.

Proteomic databases

PeptideAtlasiB7ZAG0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000479530; ENSP00000418624; ENSG00000121440.
GeneIDi23024.
UCSCiuc011bgf.2. human.

Organism-specific databases

CTDi23024.
HGNCiHGNC:17704. PDZRN3.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG0297. Eukaryota.
KOG0312. Eukaryota.
ENOG4111S26. LUCA.
GeneTreeiENSGT00510000046421.
HOVERGENiHBG053554.

Miscellaneous databases

ChiTaRSiPDZRN3. human.
GenomeRNAii23024.

Gene expression databases

BgeeiENSG00000121440.

Family and domain databases

Gene3Di2.30.42.10. 2 hits.
InterProiIPR001478. PDZ.
[Graphical view]
PfamiPF00595. PDZ. 1 hit.
[Graphical view]
SMARTiSM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 2 hits.
PROSITEiPS50106. PDZ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB7ZAG0_HUMAN
AccessioniPrimary (citable) accession number: B7ZAG0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: September 7, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.