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Protein
Submitted name:

cDNA FLJ55601, highly similar to Glutaminyl-tRNA synthetase (EC 6.1.1.18)

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetaseImported, Ligase

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ55601, highly similar to Glutaminyl-tRNA synthetase (EC 6.1.1.18)Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 282264Sequence analysisPRO_5002866797Add
BLAST

Proteomic databases

PaxDbiB7Z840.
PeptideAtlasiB7Z840.
PRIDEiB7Z840.

Expressioni

Gene expression databases

BgeeiB7Z840.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000307567.

Structurei

3D structure databases

ProteinModelPortaliB7Z840.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 180156tRNA_synt_1c_R1InterPro annotationAdd
BLAST
Domaini183 – 25371tRNA_synt_1c_R2InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1148. Eukaryota.
COG0008. LUCA.
KOiK01886.

Family and domain databases

InterProiIPR007638. Gln-tRNA-synth_Ib_RNA-bd_2.
IPR007639. Gln-tRNA-synth_Ib_RNA-bd_N.
[Graphical view]
PfamiPF04558. tRNA_synt_1c_R1. 1 hit.
PF04557. tRNA_synt_1c_R2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7Z840-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTCRLGPKF LLVSGVSAMA ALDSLSLFTS LGLSEQKARE TLKNSALSAQ
60 70 80 90 100
LREAATQAQQ TLGSTIDKAT GILLYGLASR LRDTRRLSFL VSYIASKKIH
110 120 130 140 150
TEPQLSAALE YVRSHPLDPI DTVDFERECG VGVIVTPEQI EEAVEAAINR
160 170 180 190 200
HRPQLLVERY HFNMGLLMGE ARAVLKWADG KMIKNEVDMQ VLHLLGPKLE
210 220 230 240 250
ADLEKKFKVA KARLEETDRR TAKDVVENGE TADQTLSLME QLRGEALKFH
260 270 280
KPGTYPVPAR TQWNPAYWTC QSHQFQLWLC QV
Length:282
Mass (Da):31,571
Last modified:March 3, 2009 - v1
Checksum:i5D10DAF0D8582767
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK302867 mRNA. Translation: BAH13826.1.
RefSeqiNP_001259002.1. NM_001272073.1.
NP_005042.1. NM_005051.2.
UniGeneiHs.79322.

Genome annotation databases

GeneIDi5859.
KEGGihsa:5859.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK302867 mRNA. Translation: BAH13826.1.
RefSeqiNP_001259002.1. NM_001272073.1.
NP_005042.1. NM_005051.2.
UniGeneiHs.79322.

3D structure databases

ProteinModelPortaliB7Z840.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000307567.

Proteomic databases

PaxDbiB7Z840.
PeptideAtlasiB7Z840.
PRIDEiB7Z840.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5859.
KEGGihsa:5859.

Organism-specific databases

CTDi5859.

Phylogenomic databases

eggNOGiKOG1148. Eukaryota.
COG0008. LUCA.
KOiK01886.

Miscellaneous databases

ChiTaRSiQARS. human.
GenomeRNAii5859.

Gene expression databases

BgeeiB7Z840.

Family and domain databases

InterProiIPR007638. Gln-tRNA-synth_Ib_RNA-bd_2.
IPR007639. Gln-tRNA-synth_Ib_RNA-bd_N.
[Graphical view]
PfamiPF04558. tRNA_synt_1c_R1. 1 hit.
PF04557. tRNA_synt_1c_R2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: TestisImported.

Entry informationi

Entry nameiB7Z840_HUMAN
AccessioniPrimary (citable) accession number: B7Z840
Secondary accession number(s): E7EM76
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: July 6, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.