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B7Z6F4 (B7Z6F4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

cDNA FLJ54880, moderately similar to Chordin EMBL BAH13240.1
Gene names
Name:CHRD Ensembl ENSP00000442948
OrganismHomo sapiens (Human) [Reference proteome] EMBL BAH13240.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B7Z6F4 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 5ACFB872739DDECE

FASTA49752,790
        10         20         30         40         50         60 
MDWLVLGELQ MALEWAGRPG LRISGHIAAR KSCDVLQSVL CGADALIPVQ TGAAGSASLT 

        70         80         90        100        110        120 
LLGNGSLIYQ VQVVGTSSEV VAMTLETKPQ RRDQRTVLCH MAGLQPGGHT AVGICPGLGA 

       130        140        150        160        170        180 
RGAHMLLQNE LFLNVGTKDF PDGELRGHVA ALPYCGHSAR HDTLPVPLAG ALVLPPVKSQ 

       190        200        210        220        230        240 
AAGHAWLSLD THCHLHYEVL LAGLGGSEQG TVTAHLLGPP GTPGPRRLLK GFYGSEAQGV 

       250        260        270        280        290        300 
VKDLEPELLR HLAKGMASLM ITTKGSPRGE LRGQRRTVIC DPVVCPPPSC PHPVQAPDQC 

       310        320        330        340        350        360 
CPVCPEKQDV RDLPGLPRSR DPGEGCYFDG DRSWRAAGTR WHPVVPPFGL IKCAVCTCKG 

       370        380        390        400        410        420 
GTGEVHCEKV QCPRLACAQP VRVNPTDCCK QCPVGSGAHP QLGDPMQADG PRGCRFAGQW 

       430        440        450        460        470        480 
FPESQSWHPS VPPFGEMSCI TCRCGAGVPH CERDDCSLPL SCGSGKESRC CSRCTAHRRP 

       490 
APETRTDPEL EKEAEGS 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence, annotation and analysis of human chromosome 3."
Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J. expand/collapse author list , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Placenta EMBL BAH13240.1.
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC078797 Genomic DNA. No translation available.
AK300213 mRNA. Translation: BAH13240.1.
UniGeneHs.166186.

3D structure databases

ProteinModelPortalB7Z6F4.
SMRB7Z6F4. Positions 266-308, 321-397, 409-478.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000545352; ENSP00000442948; ENSG00000090539.
UCSCuc011brr.2. human.

Organism-specific databases

HGNCHGNC:1949. CHRD.
GenAtlasSearch...

Phylogenomic databases

HOVERGENHBG005330.

Family and domain databases

InterProIPR010895. CHRD.
IPR001007. VWF_C.
[Graphical view]
PfamPF07452. CHRD. 2 hits.
PF00093. VWC. 1 hit.
[Graphical view]
SMARTSM00754. CHRD. 2 hits.
SM00214. VWC. 3 hits.
[Graphical view]
PROSITEPS50933. CHRD. 2 hits.
PS01208. VWFC_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35479958.

Entry information

Entry nameB7Z6F4_HUMAN
AccessionPrimary (citable) accession number: B7Z6F4
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: June 11, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.