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Protein

Reticulon

Gene

RTN3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
ReticulonUniRule annotation
Gene namesi
Name:RTN3Imported
ORF Names:hCG_1775344Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

HGNCiHGNC:10469. RTN3.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei62 – 9130HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiB7Z4M1.

Expressioni

Gene expression databases

BgeeiENSG00000133318.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000344106.

Structurei

3D structure databases

SMRiB7Z4M1. Positions 97-122.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini48 – 12376ReticulonInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 reticulon domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiKOG1792. Eukaryota.
ENOG410XPKH. LUCA.
GeneTreeiENSGT00390000009934.
HOGENOMiHOG000015254.

Family and domain databases

InterProiIPR003388. Reticulon.
[Graphical view]
PfamiPF02453. Reticulon. 1 hit.
[Graphical view]
PROSITEiPS50845. RETICULON. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7Z4M1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEPSAATQS HSISSSSFGA EPSAPGGGGS PGACPALGTK SCSSSCAVHD
60 70 80 90 100
LIFWRDVKKT GFVFGTTLIM LLSLAAFSVI SVVSYLILAL LSVTISFRIY
110 120
KSVIQAVQKS EEGHPFNWLS SCG
Length:123
Mass (Da):12,747
Last modified:March 3, 2009 - v1
Checksum:iF146D390062E8F8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000753 Genomic DNA. No translation available.
AP006289 Genomic DNA. No translation available.
AK297533 mRNA. Translation: BAH12607.1.
CH471076 Genomic DNA. Translation: EAW74166.1.
UniGeneiHs.743229.

Genome annotation databases

EnsembliENST00000536011; ENSP00000440960; ENSG00000133318.
UCSCiuc058crp.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000753 Genomic DNA. No translation available.
AP006289 Genomic DNA. No translation available.
AK297533 mRNA. Translation: BAH12607.1.
CH471076 Genomic DNA. Translation: EAW74166.1.
UniGeneiHs.743229.

3D structure databases

SMRiB7Z4M1. Positions 97-122.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000344106.

Proteomic databases

PeptideAtlasiB7Z4M1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000536011; ENSP00000440960; ENSG00000133318.
UCSCiuc058crp.1. human.

Organism-specific databases

HGNCiHGNC:10469. RTN3.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1792. Eukaryota.
ENOG410XPKH. LUCA.
GeneTreeiENSGT00390000009934.
HOGENOMiHOG000015254.

Miscellaneous databases

ChiTaRSiRTN3. human.

Gene expression databases

BgeeiENSG00000133318.

Family and domain databases

InterProiIPR003388. Reticulon.
[Graphical view]
PfamiPF02453. Reticulon. 1 hit.
[Graphical view]
PROSITEiPS50845. RETICULON. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB7Z4M1_HUMAN
AccessioniPrimary (citable) accession number: B7Z4M1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: September 7, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.