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Protein
Submitted name:

cDNA FLJ52540, highly similar to Lysosome-associated membrane glycoprotein 2

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ52540, highly similar to Lysosome-associated membrane glycoprotein 2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei265 – 288HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

MaxQBiB7Z2R9.
PaxDbiB7Z2R9.
PeptideAtlasiB7Z2R9.
PRIDEiB7Z2R9.

Expressioni

Gene expression databases

BgeeiENSG00000005893.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000408411.

Structurei

3D structure databases

ProteinModelPortaliB7Z2R9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4818. Eukaryota.
ENOG410XQ96. LUCA.
HOVERGENiHBG052303.

Family and domain databases

InterProiIPR002000. Lysosome-assoc_membr_glycop.
[Graphical view]
PANTHERiPTHR11506. PTHR11506. 1 hit.
PfamiPF01299. Lamp. 1 hit.
[Graphical view]
PRINTSiPR00336. LYSASSOCTDMP.
PROSITEiPS51407. LAMP_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7Z2R9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVCFRLFPVP GSGLVLVCLV LGILTVDELL AIRIPLNDLF RCNSLSTLEK
60 70 80 90 100
NDVVQHYWDV LVQAFVQNGT VSTNEFLCDK DKTSTVAPTI HTTVPSPTTT
110 120 130 140 150
PTPKEKPEAG TYSVNNGNDT CLLATMGLQL NITQDKVASV ININPNTTHS
160 170 180 190 200
TGSCRSHTAL LRLNSSTIKY LDFVFAVKNE NRFYLKEVNI SMYLVNGSVF
210 220 230 240 250
SIANNNLSYW DAPLGSSYMC NKEQTVSVSG AFQINTFDLR VQPFNVTQGK
260 270 280 290 300
YSTAEECSAD SDLNFLIPVA VGVALGFLII VVFISYMIGR RKSRTGYQSV
Length:300
Mass (Da):32,980
Last modified:March 3, 2009 - v1
Checksum:i22FD69D9C72EE378
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK295038 mRNA. Translation: BAH11955.1.
UniGeneiHs.496684.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK295038 mRNA. Translation: BAH11955.1.
UniGeneiHs.496684.

3D structure databases

ProteinModelPortaliB7Z2R9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000408411.

Proteomic databases

MaxQBiB7Z2R9.
PaxDbiB7Z2R9.
PeptideAtlasiB7Z2R9.
PRIDEiB7Z2R9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG4818. Eukaryota.
ENOG410XQ96. LUCA.
HOVERGENiHBG052303.

Miscellaneous databases

ChiTaRSiLAMP2. human.

Gene expression databases

BgeeiENSG00000005893.

Family and domain databases

InterProiIPR002000. Lysosome-assoc_membr_glycop.
[Graphical view]
PANTHERiPTHR11506. PTHR11506. 1 hit.
PfamiPF01299. Lamp. 1 hit.
[Graphical view]
PRINTSiPR00336. LYSASSOCTDMP.
PROSITEiPS51407. LAMP_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB7Z2R9_HUMAN
AccessioniPrimary (citable) accession number: B7Z2R9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: October 5, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.