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Protein
Submitted name:

cDNA FLJ55344, highly similar to Dysferlin

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ55344, highly similar to DysferlinImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PRIDEiB7Z2R1.

Expressioni

Gene expression databases

BgeeiB7Z2R1.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000386881.

Family & Domainsi

Sequence similaritiesi

Contains 5 C2 domains.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000006771.
HOVERGENiHBG106341.

Family and domain databases

Gene3Di2.60.40.150. 5 hits.
InterProiIPR000008. C2_dom.
IPR029998. Dysferlin.
[Graphical view]
PANTHERiPTHR12546:SF35. PTHR12546:SF35. 1 hit.
PfamiPF00168. C2. 5 hits.
[Graphical view]
SMARTiSM00239. C2. 4 hits.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 4 hits.
PROSITEiPS50004. C2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7Z2R1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDKSEDSMS VSTLSFGVNR PTISCIFDYG NRYHLRCYMY QARDLAAMDK
60 70 80 90 100
DSFSDPYAIV SFLHQSQKTV VVKNTLNPTW DQTLIFYEIE IFGEPATVAE
110 120 130 140 150
QPPSIVVELY DHDTYGADEF MGRCICQPSL ERMPRLAWFP LTRGSQPSGE
160 170 180 190 200
LLASFELIQR EKPAIHHIPG FEVQETSRIL DESEDTDLPY PPPQREANIY
210 220 230 240 250
MVPQNIKPAL QRTAIEILAW GLRNMKSYQL ANISSPSLVV ECGGQTVQSC
260 270 280 290 300
VIRNLRKNPN FDICTLFMEV MLPREELYCP PITVKVIDNR QFGRRPVVGQ
310 320 330 340 350
CTIRSLESFL CDPYSAESPS PQGGPDDVSL LSPGEDVLID IDDKEPLIPI
360 370 380 390 400
QEEEFIDWWS KFFASIGERE KCGSYLEKDF DTLKVYDTQL ENVEAFEGLS
410 420 430 440 450
DFCNTFKLYR GKTQEETEDP SVIGEFKGLF KIYPLPEDPA IPMPPRQFHQ
460 470 480 490 500
LAAQGPQECL VRIYIVRAFG LQPKDPNGKC DPYIKISIGK KSVSDQDNYI
510 520 530 540 550
PCTLEPVFGK MFELTCTLPL EKDLKITLYD YDLLSKDEKI GETVVDLENR
560 570 580 590 600
LLSKFGARCG LPQTYCVSGP NQWRDQLRPS QLLHLFCQQH RVKAPVYRTD
610 620 630 640 650
RVMFQDKEYS IEEIEAGRIP NPHLGPVEER LALHVLQQQG LVPEHVESRP
660 670 680 690 700
LYSPLQPDIE QGKLQMWVDL FPKALGRPGP PFNITPRRAR RFFLRCIIWN
710 720 730 740 750
TRDVILDDLS LTGEKMSDIY VKGWMIGFEE HKQKTDVHYR SLGGEGNFNW
760 770 780 790 800
RFIFPFDYLP AEQVCTIAKK DAFWRLDKTE SKIPARVVFQ IWDNDKFSFD
810 820 830 840 850
DFLGSLQLDL NRMPKPAKTA KKCSLDQLDD AFHPEWFVSL FEQKTVKGWW
860 870 880 890 900
PCVAEEGEKK ILAGKLEMTL EIVAESEHEE RPAGQGRDEP NMNPKLEDPR
910 920 930 940 950
RPDTSFLWFT SPYKTMKFIL WRRFRWAIIL FIILFILLLF LAIFIYAFPN
960
YAAMKLVKPF S
Length:961
Mass (Da):110,847
Last modified:March 3, 2009 - v1
Checksum:iE04948F52DD9DCB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK295004 mRNA. Translation: BAH11947.1.
UniGeneiHs.252180.

Genome annotation databases

UCSCiuc010yqy.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK295004 mRNA. Translation: BAH11947.1.
UniGeneiHs.252180.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000386881.

Proteomic databases

PRIDEiB7Z2R1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiuc010yqy.2. human.

Phylogenomic databases

HOGENOMiHOG000006771.
HOVERGENiHBG106341.

Miscellaneous databases

NextBioi35479054.

Gene expression databases

BgeeiB7Z2R1.

Family and domain databases

Gene3Di2.60.40.150. 5 hits.
InterProiIPR000008. C2_dom.
IPR029998. Dysferlin.
[Graphical view]
PANTHERiPTHR12546:SF35. PTHR12546:SF35. 1 hit.
PfamiPF00168. C2. 5 hits.
[Graphical view]
SMARTiSM00239. C2. 4 hits.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 4 hits.
PROSITEiPS50004. C2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiB7Z2R1_HUMAN
AccessioniPrimary (citable) accession number: B7Z2R1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: June 24, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.