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Protein
Submitted name:

cDNA FLJ52587, highly similar to Glutamate receptor 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ion channel, Ligand-gated ion channelSAAS annotation, ReceptorSAAS annotationImported

Keywords - Biological processi

Ion transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ52587, highly similar to Glutamate receptor 1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell junction, Cell membraneSAAS annotation, Membrane, Postsynaptic cell membraneSAAS annotation, Synapse

Expressioni

Gene expression databases

BgeeiB7Z1W1.

Structurei

3D structure databases

ProteinModelPortaliB7Z1W1.
SMRiB7Z1W1. Positions 29-712.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

HOVERGENiHBG051839.

Family and domain databases

InterProiIPR001828. ANF_lig-bd_rcpt.
IPR019594. Glu/Gly-bd.
IPR001508. Iono_rcpt_met.
IPR001320. Iontro_rcpt.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF01094. ANF_receptor. 1 hit.
PF00060. Lig_chan. 1 hit.
PF10613. Lig_chan-Glu_bd. 1 hit.
[Graphical view]
PRINTSiPR00177. NMDARECEPTOR.
SMARTiSM00918. Lig_chan-Glu_bd. 1 hit.
SM00079. PBPe. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.

Sequencei

Sequence statusi: Complete.

B7Z1W1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQHIFAFFCT GFLGAVVGAN FPNNIQIVCS QFSKGVYAIF GFYERRTVNM
60 70 80 90 100
LTSFCGALHV CFITPSFPVD TSNQFVLQLR PELQDALISI IDHYKWQKFV
110 120 130 140 150
YIYDADRGLS VLQKVLDTAA EKNWQVTAVN ILTTTEEGYR MLFQDLEKKK
160 170 180 190 200
ERLVVVDCES ERLNAILGQI IKLEKNGIGY HYILANLGFM DIDLNKFKES
210 220 230 240 250
GANVTGFQLV NYTDTIPAKI MQQWKNSDAR DHTRVDWKRP KYTSALTYDG
260 270 280 290 300
VKVMAEAFQS LRRQRIDISR RGNAGDCLAN PAVPWGQGID IQRALQQVRF
310 320 330 340 350
EGLTGNVQFN EKGRRTNYTL HVIEMKHDGI RKIGYWNEDD KFVPAATDAQ
360 370 380 390 400
AGGDNSSVQN RTYIVTTILE DPYVMLKKNA NQFEGNDRYE GYCVELAAEI
410 420 430 440 450
AKHVGYSYRL EIVSDGKYGA RDPDTKAWNG MVGELVYGRA DVAVAPLTIT
460 470 480 490 500
LVREEVIDFS KPFMSLGISI MIKKPQKSKP GVFSFLDPLA YEIWMCIVFA
510 520 530 540 550
YIGVSVVLFL VSRFSPYEWH SEEFEEGRDQ TTSDQSNEFG IFNSLWFSLG
560 570 580 590 600
AFMQQGCDIS PRSLSGRIVG GVWWFFTLII ISSYTANLAA FLTVERMVSP
610 620 630 640 650
IESAEDLAKQ TEIAYGTLEA GSTKEFFRRS KIAVFEKMWT YMKSAEPSVF
660 670 680 690 700
VRTTEEGMIR VRKSKGKYAY LLESTMNEYI EQRKPCDTMK VGGNLDSKGY
710
GIATPKGSAL RTRQAL
Length:716
Mass (Da):81,131
Last modified:March 3, 2009 - v1
Checksum:i74E47E920EF71AC0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294011 mRNA. Translation: BAH11647.1.
UniGeneiHs.519693.
Hs.737709.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294011 mRNA. Translation: BAH11647.1.
UniGeneiHs.519693.
Hs.737709.

3D structure databases

ProteinModelPortaliB7Z1W1.
SMRiB7Z1W1. Positions 29-712.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG051839.

Miscellaneous databases

NextBioi35478836.

Gene expression databases

BgeeiB7Z1W1.

Family and domain databases

InterProiIPR001828. ANF_lig-bd_rcpt.
IPR019594. Glu/Gly-bd.
IPR001508. Iono_rcpt_met.
IPR001320. Iontro_rcpt.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF01094. ANF_receptor. 1 hit.
PF00060. Lig_chan. 1 hit.
PF10613. Lig_chan-Glu_bd. 1 hit.
[Graphical view]
PRINTSiPR00177. NMDARECEPTOR.
SMARTiSM00918. Lig_chan-Glu_bd. 1 hit.
SM00079. PBPe. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: CerebellumImported.

Entry informationi

Entry nameiB7Z1W1_HUMAN
AccessioniPrimary (citable) accession number: B7Z1W1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: July 22, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.