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B7XC04

- B7XC04_RHIOR

UniProt

B7XC04 - B7XC04_RHIOR

Protein
Submitted name:

Glucoamylase

Gene

amyA

Organism
Rhizopus oryzae (Mucormycosis agent) (Rhizopus arrhizus var. delemar)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi26 – 261ZincImported
    Metal bindingi37 – 371ZincImported
    Binding sitei83 – 831GlucoseImported
    Binding sitei93 – 931GlucoseImported

    GO - Molecular functioni

    1. glucan 1,4-alpha-glucosidase activity Source: InterPro
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. polysaccharide metabolic process Source: InterPro

    Keywords - Ligandi

    Metal-bindingImported, ZincImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    GlucoamylaseImported
    Gene namesi
    Name:amyAImported
    OrganismiRhizopus oryzae (Mucormycosis agent) (Rhizopus arrhizus var. delemar)Imported
    Taxonomic identifieri64495 [NCBI]
    Taxonomic lineageiEukaryotaFungiFungi incertae sedisEarly diverging fungal lineagesMucoromycotinaMucoralesMucorineaeRhizopodaceaeRhizopus

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2V8LX-ray1.80A26-131[»]
    2V8MX-ray2.30A/B/C/D26-131[»]
    4EIBX-ray1.86A/B26-131[»]
    ProteinModelPortaliB7XC04.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni54 – 596Glucose bindingImported

    Family and domain databases

    Gene3Di1.50.10.10. 1 hit.
    InterProiIPR008928. 6-hairpin_glycosidase-like.
    IPR012341. 6hp_glycosidase.
    IPR005036. CBM_21.
    IPR000165. Glucoamylase.
    IPR011613. Glyco_hydro_15.
    [Graphical view]
    PfamiPF03370. CBM_21. 1 hit.
    PF00723. Glyco_hydro_15. 1 hit.
    [Graphical view]
    PRINTSiPR00736. GLHYDRLASE15.
    SUPFAMiSSF48208. SSF48208. 1 hit.
    PROSITEiPS51159. CBM21. 1 hit.
    PS00820. GLUCOAMYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B7XC04-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLFNLPLKV SFFLVLSYFS LLVSAASIPS SASVQLDSYN YDGSTFSGKI    50
    YVKNIAYSKK VTVVYADGSD NWNNNGNIIA ASFSGPISGS NYEYWTFSAS 100
    VKGIKEFYIK YEVSGKTYYD NNNSANYQVS TSKPTTTTTA TTTTTAPSTS 150
    TTTRPSSSEP ATFPTGNSTI SSWIKKQEDI SRFAMLRNIN PPGSATGFIA 200
    ASLSTAGPDY YYAWTRDAAL TSNVIVYEYN TTLSGNKTIL NVLKDYVTFS 250
    VKTQSTSTVC NCLGEPKFNP DGSGYTGAWG RPQNDGPAER ATTFVLFADS 300
    YLTQTKDASY VTGTLKPAIF KDLDYVVNVW SNGCFDLWEE VNGVHFYTLM 350
    VMRKGLLLGA DFAKRNGDST RASTYSSTAS TIANKISSFW VSSNNWVQVS 400
    QSVTGGVSKK GLDVSTLLAA NLGSVDDGFF TPGSEKILAT AVAVEDSFAS 450
    LYPINKNLPS YLGNAIGRYP EDTYNGNGNS QGNPWFLAVT GYAELYYRAI 500
    KEWISNGGVT VSSISLPFFK KFDSSATSGK KYTVGTSDFN NLAQNIALAA 550
    DRFLSTVQLH APKNGSLAEE FDRTTGFSTG ARDLTWSHAS LITASYAKAG 600
    APAA 604
    Length:604
    Mass (Da):65,198
    Last modified:March 3, 2009 - v1
    Checksum:i2B426455F3D4200D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB444727 Genomic DNA. Translation: BAH09876.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB444727 Genomic DNA. Translation: BAH09876.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2V8L X-ray 1.80 A 26-131 [» ]
    2V8M X-ray 2.30 A/B/C/D 26-131 [» ]
    4EIB X-ray 1.86 A/B 26-131 [» ]
    ProteinModelPortali B7XC04.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 1.50.10.10. 1 hit.
    InterProi IPR008928. 6-hairpin_glycosidase-like.
    IPR012341. 6hp_glycosidase.
    IPR005036. CBM_21.
    IPR000165. Glucoamylase.
    IPR011613. Glyco_hydro_15.
    [Graphical view ]
    Pfami PF03370. CBM_21. 1 hit.
    PF00723. Glyco_hydro_15. 1 hit.
    [Graphical view ]
    PRINTSi PR00736. GLHYDRLASE15.
    SUPFAMi SSF48208. SSF48208. 1 hit.
    PROSITEi PS51159. CBM21. 1 hit.
    PS00820. GLUCOAMYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structures of the starch-binding domain from Rhizopus oryzae glucoamylase reveal a polysaccharide-binding path."
      Tung J.Y., Chang M.D., Chou W.I., Liu Y.Y., Yeh Y.H., Chang F.Y., Lin S.C., Qiu Z.L., Sun Y.J.
      Biochem. J. 416:27-36(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 26-131 IN COMPLEX WITH GLUCOSE AND ZINC.
    2. "Comparison of sucrose-hydrolyzing enzymes produced by Rhizopus oryzae and Amylomyces rouxii."
      Watanabe T., Oda Y.
      Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NBRC 4785Imported.
    3. "Crystal structure of circular permuted RoCBM21 (CP90): dimerisation and proximity of binding sites."
      Stephen P., Cheng K.C., Lyu P.C.
      PLoS ONE 7:e50488-e50488(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.86 ANGSTROMS) OF 26-131.

    Entry informationi

    Entry nameiB7XC04_RHIOR
    AccessioniPrimary (citable) accession number: B7XC04
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3