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B7VU09 (B7VU09_VIBSL) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein-export membrane protein SecF HAMAP-Rule MF_01464
Gene names
Name:secF HAMAP-Rule MF_01464
Ordered Locus Names:VS_II1481
OrganismVibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32)) [Complete proteome] [HAMAP]
Taxonomic identifier575788 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio ›

Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA By similarity. HAMAP-Rule MF_01464

Subunit structure

Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC By similarity. HAMAP-Rule MF_01464

Subcellular location

Cell inner membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01464.

Sequence similarities

Belongs to the SecD/SecF family. SecF subfamily. HAMAP-Rule MF_01464

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Transmembrane20 – 4021Helical; By similarity HAMAP-Rule MF_01464
Transmembrane131 – 15121Helical; By similarity HAMAP-Rule MF_01464
Transmembrane158 – 17821Helical; By similarity HAMAP-Rule MF_01464
Transmembrane185 – 20521Helical; By similarity HAMAP-Rule MF_01464
Transmembrane250 – 27021Helical; By similarity HAMAP-Rule MF_01464

Sequences

Sequence LengthMass (Da)Tools
B7VU09 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: DBA89E82741EF9AC

FASTA30733,163
        10         20         30         40         50         60 
MSISNMTISN SSMTRLRKVM SVISIVLFMS SVMLVAVKGF NWGLDFTGGV VAEVQLSDQV 

        70         80         90        100        110        120 
TKDALKTKLD TAFQQDVQVV GMAEQDRWTI RYSQLTDAPQ PNLVDALSSV SDQVKVLNSS 

       130        140        150        160        170        180 
VVGPQVGQDM VDQGGLAVLV CFLMIMLYLS VRFEWRLALG ALAAIIYDVT LILGLFAFTQ 

       190        200        210        220        230        240 
FEFNLTVLAA VLAILGYSLN DSIIIADRVR EMLRGNPNGD TDNLLNESVK ATFSRTMVTS 

       250        260        270        280        290        300 
GTTLITVSAL WLLGGAALQG FAIALVVGIV SGTWSSISVG ITLPKLLGLQ PCHYQVKPVV 


EVEGEYP

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References

[1]"Vibrio splendidus str. LGP32 complete genome."
Mazel D., Le Roux F.
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LGP32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FM954973 Genomic DNA. Translation: CAV27663.1.
RefSeqYP_002396040.1. NC_011744.2.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING575788.VS_II1481.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAV27663; CAV27663; VS_II1481.
GeneID7138747.
KEGGvsp:VS_II1481.
PATRIC20150657. VBIVibSpl48387_1369.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0341.
HOGENOMHOG000245914.
KOK03074.
OMASSIVGPQ.
ProtClustDBCLSK2411320.

Enzyme and pathway databases

BioCycVSPL575788:GH64-4552-MONOMER.

Family and domain databases

HAMAPMF_01464_B. SecF_B.
InterProIPR022813. SecD/SecF_arch_bac.
IPR022645. SecD/SecF_bac.
IPR022646. SecD/SecF_CS.
IPR005665. SecF_bac.
[Graphical view]
PfamPF07549. Sec_GG. 1 hit.
PF02355. SecD_SecF. 1 hit.
[Graphical view]
PRINTSPR01755. SECFTRNLCASE.
TIGRFAMsTIGR00916. 2A0604s01. 1 hit.
TIGR00966. 3a0501s07. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7VU09_VIBSL
AccessionPrimary (citable) accession number: B7VU09
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 29, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info