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B7VQR3 (B7VQR3_VIBSL) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:VS_II0295 EMBL CAV25697.1
OrganismVibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32)) [Complete proteome] [HAMAP] EMBL CAV25697.1
Taxonomic identifier575788 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length456 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B7VQR3 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: CC020705EE66C492

FASTA45651,676
        10         20         30         40         50         60 
MLSTPATDVI LHAFDWCYAD VMKNAPLIQE LGYKSVLVSP AMKSLRGPKG CDRDTGTQWW 

        70         80         90        100        110        120 
QRYQPQDYRV IDNQLGDTQD FTAMVNTLKQ HGLRTYVDVV FNHMANESSI RGDLTYPNQQ 

       130        140        150        160        170        180 
DMASYQQDSE YYESVRLFGD LSKPLFDEND FVEAFGIKNW KDTWEVQNGR ITGGASDPGL 

       190        200        210        220        230        240 
PTLLDNDNVV TQQRAYLKAL KVIGVKGFRI DAAKHMTLSH LRKVWTDDIC EEMHIFGEII 

       250        260        270        280        290        300 
TDGGATKEEY ELFLEPYLKH TRLGAYDFPL FNTIFKAFEE QGSFKSLINP YCFGQALSNM 

       310        320        330        340        350        360 
RAITFAVTHD IPNNEVFLEH VMDEVDEQLA HAFILGRDGG VPLVYSELST SGILDKSGQP 

       370        380        390        400        410        420 
RWLNDWQAPY MKNMIQFHNH VHGEAMQVVE ANDDLLVFVR GDKGIVVINK SKRSKTASLN 

       430        440        450 
WTGAVTDLLS GEVFECVGKD LTIKVESNQC MMLTTN 

« Hide

References

[1]"Vibrio splendidus str. LGP32 complete genome."
Mazel D., Le Roux F.
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LGP32 EMBL CAV25697.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM954973 Genomic DNA. Translation: CAV25697.1.
RefSeqYP_002394895.1. NC_011744.2.

3D structure databases

ProteinModelPortalB7VQR3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING575788.VS_II0295.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAV25697; CAV25697; VS_II0295.
GeneID7137605.
KEGGvsp:VS_II0295.
PATRIC20148456. VBIVibSpl48387_0289.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000274290.
KOK01176.
OMALGAYDFP.
OrthoDBEOG6RZB1B.
ProtClustDBCLSK2394055.

Enzyme and pathway databases

BioCycVSPL575788:GH64-3379-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7VQR3_VIBSL
AccessionPrimary (citable) accession number: B7VQR3
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: November 13, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)