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B7VNV5

- B7VNV5_VIBSL

UniProt

B7VNV5 - B7VNV5_VIBSL

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

VS_1518

Organism
Vibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (10 Feb 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciVSPL575788:GH64-1488-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:VS_1518Imported
    OrganismiVibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32))Imported
    Taxonomic identifieri575788 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000009100: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi575788.VS_1518.

    Structurei

    3D structure databases

    ProteinModelPortaliB7VNV5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B7VNV5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLTTTDINTE QMMRLTKLAI ATLWACSLSS HSSYLPPDHL VLANTYQQGI    50
    DVSEYWKSEK LDGIRALWDG QHLYTRNGNR IYSPKWFTKN LPKVHLEGEL 100
    WAGRGKFHLV QSTVLDHTPS DVAWRQIDLM LFDMPGATGD YQKRYYNILH 150
    WVSMIGEPHV SYIEHVPIQN EEALFYQLDN VDERNGEGLM LRKITSRYQA 200
    GRSNDLLKLK RHHDAEATVI GYKGGTGKYK GMMGSILVHT EEGVEFYIGS 250
    GFSDQMRLAP PEIGSRITFR YNGFTQNGKP KFARFVREKS EY 292
    Length:292
    Mass (Da):33,587
    Last modified:February 10, 2009 - v1
    Checksum:i86418BC86F554DE2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FM954972 Genomic DNA. Translation: CAV18687.1.
    RefSeqiYP_002417130.1. NC_011753.2.

    Genome annotation databases

    EnsemblBacteriaiCAV18687; CAV18687; VS_1518.
    GeneIDi7161090.
    KEGGivsp:VS_1518.
    PATRICi20153654. VBIVibSpl48387_2813.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FM954972 Genomic DNA. Translation: CAV18687.1 .
    RefSeqi YP_002417130.1. NC_011753.2.

    3D structure databases

    ProteinModelPortali B7VNV5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 575788.VS_1518.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAV18687 ; CAV18687 ; VS_1518 .
    GeneIDi 7161090.
    KEGGi vsp:VS_1518.
    PATRICi 20153654. VBIVibSpl48387_2813.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci VSPL575788:GH64-1488-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Vibrio splendidus str. LGP32 complete genome."
      Mazel D., Le Roux F.
      Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: LGP32Imported.

    Entry informationi

    Entry nameiB7VNV5_VIBSL
    AccessioniPrimary (citable) accession number: B7VNV5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 10, 2009
    Last sequence update: February 10, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3