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B7VNV5

- B7VNV5_VIBSL

UniProt

B7VNV5 - B7VNV5_VIBSL

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

VS_1518

Organism
Vibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciVSPL575788:GH64-1488-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:VS_1518Imported
OrganismiVibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32))Imported
Taxonomic identifieri575788 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000009100: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi575788.VS_1518.

Structurei

3D structure databases

ProteinModelPortaliB7VNV5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7VNV5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLTTTDINTE QMMRLTKLAI ATLWACSLSS HSSYLPPDHL VLANTYQQGI
60 70 80 90 100
DVSEYWKSEK LDGIRALWDG QHLYTRNGNR IYSPKWFTKN LPKVHLEGEL
110 120 130 140 150
WAGRGKFHLV QSTVLDHTPS DVAWRQIDLM LFDMPGATGD YQKRYYNILH
160 170 180 190 200
WVSMIGEPHV SYIEHVPIQN EEALFYQLDN VDERNGEGLM LRKITSRYQA
210 220 230 240 250
GRSNDLLKLK RHHDAEATVI GYKGGTGKYK GMMGSILVHT EEGVEFYIGS
260 270 280 290
GFSDQMRLAP PEIGSRITFR YNGFTQNGKP KFARFVREKS EY
Length:292
Mass (Da):33,587
Last modified:February 10, 2009 - v1
Checksum:i86418BC86F554DE2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FM954972 Genomic DNA. Translation: CAV18687.1.
RefSeqiYP_002417130.1. NC_011753.2.

Genome annotation databases

EnsemblBacteriaiCAV18687; CAV18687; VS_1518.
GeneIDi7161090.
KEGGivsp:VS_1518.
PATRICi20153654. VBIVibSpl48387_2813.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FM954972 Genomic DNA. Translation: CAV18687.1 .
RefSeqi YP_002417130.1. NC_011753.2.

3D structure databases

ProteinModelPortali B7VNV5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 575788.VS_1518.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAV18687 ; CAV18687 ; VS_1518 .
GeneIDi 7161090.
KEGGi vsp:VS_1518.
PATRICi 20153654. VBIVibSpl48387_2813.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci VSPL575788:GH64-1488-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Vibrio splendidus str. LGP32 complete genome."
    Mazel D., Le Roux F.
    Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LGP32Imported.

Entry informationi

Entry nameiB7VNV5_VIBSL
AccessioniPrimary (citable) accession number: B7VNV5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: October 1, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3