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B7VNV5 (B7VNV5_VIBSL) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP-dependent DNA ligase EMBL CAV18687.1
Gene names
Ordered Locus Names:VS_1518
OrganismVibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32)) [Complete proteome] [HAMAP]
Taxonomic identifier575788 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio ›

Protein attributes

Sequence length292 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CAV18687.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B7VNV5 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 86418BC86F554DE2

FASTA29233,587
        10         20         30         40         50         60 
MLTTTDINTE QMMRLTKLAI ATLWACSLSS HSSYLPPDHL VLANTYQQGI DVSEYWKSEK 

        70         80         90        100        110        120 
LDGIRALWDG QHLYTRNGNR IYSPKWFTKN LPKVHLEGEL WAGRGKFHLV QSTVLDHTPS 

       130        140        150        160        170        180 
DVAWRQIDLM LFDMPGATGD YQKRYYNILH WVSMIGEPHV SYIEHVPIQN EEALFYQLDN 

       190        200        210        220        230        240 
VDERNGEGLM LRKITSRYQA GRSNDLLKLK RHHDAEATVI GYKGGTGKYK GMMGSILVHT 

       250        260        270        280        290 
EEGVEFYIGS GFSDQMRLAP PEIGSRITFR YNGFTQNGKP KFARFVREKS EY

« Hide

References

[1]"Vibrio splendidus str. LGP32 complete genome."
Mazel D., Le Roux F.
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LGP32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FM954972 Genomic DNA. Translation: CAV18687.1.
RefSeqYP_002417130.1. NC_011753.2.

3D structure databases

ProteinModelPortalB7VNV5.
ModBaseSearch...

Protein-protein interaction databases

STRING575788.VS_1518.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAV18687; CAV18687; VS_1518.
GeneID7161090.
KEGGvsp:VS_1518.
PATRIC20153654. VBIVibSpl48387_2813.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000293070.
KOK01971.
OMAVRGYWDG.
ProtClustDBPRK09125.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7VNV5_VIBSL
AccessionPrimary (citable) accession number: B7VNV5
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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