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B7VM77 (B7VM77_VIBSL) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:VS_2972 EMBL CAV20267.1
OrganismVibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32)) [Complete proteome] [HAMAP] EMBL CAV20267.1
Taxonomic identifier575788 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length412 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding37 – 448GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding99 – 1035GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding154 – 1574GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
B7VM77 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 4770C27F181ACD5B

FASTA41245,348
        10         20         30         40         50         60 
MVAWSYFKPP NPYLEGHPMS KEKFERTKPH VNVGTIGHVD HGKTTLTAAI CTTLAKVYGG 

        70         80         90        100        110        120 
VAKDFASIDN APEERERGIT IATSHVEYDT PERHYAHVDC PGHADYVKNM ITGAAQMDGG 

       130        140        150        160        170        180 
ILVVAATDGP MPQTREHILL GRQVGIPYII VFMNKCDMVD DEELLELVEM EVRELLSEYE 

       190        200        210        220        230        240 
YPGDDLPVIQ GSALGALNGE KQWEDKIVEL AEALDSYIPL PERAVDLPFL LPIEDVFSIQ 

       250        260        270        280        290        300 
GRGTVVTGRI ERGILRVGDE VEIVGIKETT LTTCTGVEMF RKLLDEGRAG ENVGALLRGT 

       310        320        330        340        350        360 
KRDDVERGQV LSAKGSINPH TKFESEVYVL SKDEGGRHTP FFKGYRPQFY FRTTDVTGDI 

       370        380        390        400        410 
TLPEGVEMVM PGDNVQMTVE LIAPIAMDEG LRFAIREGGR TVGAGVVAKI FA 

« Hide

References

[1]"Vibrio splendidus str. LGP32 complete genome."
Mazel D., Le Roux F.
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LGP32 EMBL CAV20267.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM954972 Genomic DNA. Translation: CAV20267.1.
RefSeqYP_002418508.1. NC_011753.2.

3D structure databases

ProteinModelPortalB7VM77.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING575788.VS_2972.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAV20267; CAV20267; VS_2972.
GeneID7162454.
KEGGvsp:VS_2972.
PATRIC20156474. VBIVibSpl48387_4179.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAGTEMCMP.
OrthoDBEOG6R5C6X.

Enzyme and pathway databases

BioCycVSPL575788:GH64-2917-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7VM77_VIBSL
AccessionPrimary (citable) accession number: B7VM77
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: June 11, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)