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B7VM42 (GLGA_VIBSL) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:VS_1083
OrganismVibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32)) [Complete proteome] [HAMAP]
Taxonomic identifier575788 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 484484Glycogen synthase HAMAP-Rule MF_00484
PRO_1000190092

Sites

Binding site201ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B7VM42 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 0ABB2EACE7E1B041

FASTA48454,097
        10         20         30         40         50         60 
MVTKTLSVLF VASEVEGLIK SGGLADVAKA LPKALQTLEQ DVRVTIPAYR NIPNIDSAEV 

        70         80         90        100        110        120 
ILSTELDHWP HTAYQVKKLS VEGVQIFAIE CAKYFDRPEM YAENNQAYAD NGERFSFFST 

       130        140        150        160        170        180 
ACLDMLPKLA FQPDIIHAND WHTGFVPFLL KSRYQQHDFF ENTRSVISIH NAVFKGVFAY 

       190        200        210        220        230        240 
DELQCLSEMH SYNVPEASVS DTHVTMLKAG VMCADKINAV SPTYAEELKT ELGSHGMAAE 

       250        260        270        280        290        300 
FQHRSADLFG ILNGCDYGAW NPETDAFLPR KFKATKHSMT RGKSACKQKL QQDVGLPVTD 

       310        320        330        340        350        360 
CAVYGMVCRL TNQKGVHYLL PIIEQFLKNE LQIVIVGTGD PVLASQLKEL SALHSDKFSF 

       370        380        390        400        410        420 
VEAYNNELAH LVEAGSDFFL MPSEFEPCGL NQIYSMAYGT LPIVRSVGGL KDSVNDYDQE 

       430        440        450        460        470        480 
PEIATGFAFE EPTPQALLAV LHRSLLLYAQ NPSEIKRVQL YAMQQDFSWE DAAEEYLAMY 


HSAF 

« Hide

References

[1]"Vibrio splendidus str. LGP32 complete genome."
Mazel D., Le Roux F.
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LGP32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM954972 Genomic DNA. Translation: CAV18193.1.
RefSeqYP_002416698.1. NC_011753.2.

3D structure databases

ProteinModelPortalB7VM42.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING575788.VS_1083.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAV18193; CAV18193; VS_1083.
GeneID7160675.
KEGGvsp:VS_1083.
PATRIC20152840. VBIVibSpl48387_2407.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMALLKTMYA.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycVSPL575788:GH64-1053-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_VIBSL
AccessionPrimary (citable) accession number: B7VM42
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: February 10, 2009
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways