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B7VIZ7 (B7VIZ7_VIBSL) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VS_0444
OrganismVibrio splendidus (strain LGP32) (Vibrio splendidus (strain Mel32)) [Complete proteome] [HAMAP]
Taxonomic identifier575788 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length585 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan-based cell wall biogenesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpenicillin binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B7VIZ7 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: A388DF21F874C4DF

FASTA58563,702
        10         20         30         40         50         60 
MTGKKEKTPA KTVNESTKER VKSEKDLDPI LIKWRFNVVI AFVFLAFAAL VGRVAYIQII 

        70         80         90        100        110        120 
EPDNLIRQGD LRSVRVKAIP SARGIISDRN GEPLAVSVPV EAVWADPKTI FDKNGMAQID 

       130        140        150        160        170        180 
RWYALADVLG LQRQSMIDKI SSNKSRRFIY LQRQVSPAMA KYIRELKLVG VGLKAESRRY 

       190        200        210        220        230        240 
YPAGEVSAHL IGVTGIDGHG LEGVERSYDK WLTGEAGKRT IRKDRYGRVV ENIALEEREE 

       250        260        270        280        290        300 
GKPLELTIDQ RLQAIAYRAI KQAVADHKAT SGSAVLLDVK TGAVLAMVNA PSYNPNNRSD 

       310        320        330        340        350        360 
LQSFKMRNRV LTDAMEPGST VKPFVVLAAL ENGTADAKSI IDTGNGIMQI GGSRVRDTSK 

       370        380        390        400        410        420 
VGKADLALIL KKSSNIGVAK LALDMPLEAL LGMYSSVGLG EMSGLNLVGE TSGIFPNRRR 

       430        440        450        460        470        480 
WSKFEIATLS FGYGLSVTPL QLAHAYATLA NKGMYEPIHI IKSNDQDFSK QIIKRENAEM 

       490        500        510        520        530        540 
VLQMLEGVTQ KGGTATRAAV PGYRVAAKTG TSRKAAAGGY SDEYIAITSG FAPVSDPRVA 

       550        560        570        580 
LVVVVNEPQG DLYYGGSVAA PVFSEIMKGA LQILNVPADE NKFQE 

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References

[1]"Vibrio splendidus str. LGP32 complete genome."
Mazel D., Le Roux F.
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LGP32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM954972 Genomic DNA. Translation: CAV17451.1.
RefSeqYP_002416101.1. NC_011753.2.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING575788.VS_0444.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAV17451; CAV17451; VS_0444.
GeneID7160079.
KEGGvsp:VS_0444.
PATRIC20151592. VBIVibSpl48387_1810.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0768.
HOGENOMHOG000049554.
KOK03587.
OMANTLYDAR.
ProtClustDBCLSK874791.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamPF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMSSF56519. PBP_dimer. 1 hit.
SSF56601. PBP_transp_fold. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7VIZ7_VIBSL
AccessionPrimary (citable) accession number: B7VIZ7
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)