B7UZ93 (B7UZ93_PSEA8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exodeoxyribonuclease I EMBL CAW29448.1

Gene names

Name:	sbcB EMBL CAW29448.1
Ordered Locus Names:	PLES_46941

Organism

Pseudomonas aeruginosa (strain LESB58) [Complete proteome] [HAMAP]

Taxonomic identifier

557722 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas aeruginosa group › Pseudomonas aeruginosa

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	exodeoxyribonuclease I activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B7UZ93 [UniParc]. Last modified February 10, 2009. Version 1. Checksum: 913D1DF2E6FD1889	FASTA	480	55,422
	10 20 30 40 50 60 MTVNASIFWY DYETTGIDPR RDRPLQIAGI RTDEALNEIG EPMNLYCRPS DDILPHPMAC 70 80 90 100 110 120 LITGITPQRL AERGLSEADF MTRVHAQLAQ PATCVAGYNS LRFDDEVTRY SLYRNFFDPY 130 140 150 160 170 180 AREWQGGNSR WDLIDMVRTA YALRPEGIQW PQLDGRLSLK LEMLTAANGL EHGQAHDALS 190 200 210 220 230 240 DVRATIALAR LIRQRQPRLY DYLYQLRSKH KVLDQVRLLQ PLVHVSGRFS AERHFLSVAL 250 260 270 280 290 300 PLAWHPRNRN ALIVCDLCAD PAPLLELSAE DLRRRLYTRR DELAEGELPV PLKQIQVNRC 310 320 330 340 350 360 PVVAPLSVLR AEDRQRTGIE LDECQQKAEL LRQHQTVWAD KLTALYGEES FSASDDPEQQ 370 380 390 400 410 420 LYDGFIGDRD RRLCEQLRLA EPEQLAKEQW PFDDARLQEL FFRYRARNFP ETLNVAERQQ 430 440 450 460 470 480 WESFCRNRLS HEEYGAPNTL PAFEAALEAC RQEQGGTLPA VLAAWRDYAA ELRQRYSLET

References

[1]

"Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool epidemic strain of Pseudomonas aeruginosa." Winstanley C., Langille M.G.I., Fothergill J.L., Kukavica-Ibrulj I., Paradis-Bleau C., Sanschagrin F., Thomson N.R., Winsor G.L., Quail M.A., Lennard N., Bignell A., Clarke L., Seeger K., Saunders D., Harris D., Parkhill J., Hancock R.E.W., Brinkman F.S.L., Levesque R.C. Genome Res. 19:12-23(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: LESB58.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM209186 Genomic DNA. Translation: CAW29448.1.
RefSeq	YP_002442275.1. NC_011770.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	557722.PLES_46941.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAW29448; CAW29448; PLES_46941.
GeneID	7180374.
KEGG	pag:PLES_46941.
PATRIC	19819215. VBIPseAer113719_4819.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2925.
HOGENOM	HOG000276591.
KO	K01141.
OMA	PYAREWQ.
ProtClustDB	PRK11779.
Enzyme and pathway databases
BioCyc	PAER557722:GHJW-5840-MONOMER.
Family and domain databases
InterPro	IPR023607. Exodeoxyribonuclease_I. IPR013620. Exonuc_X-T_C. IPR013520. Exonuclease_RNaseT/DNA_pol3. IPR012337. RNaseH-like_dom. [Graphical view]
Pfam	PF08411. Exonuc_X-T_C. 1 hit. PF00929. RNase_T. 1 hit. [Graphical view]
PIRSF	PIRSF000977. Exodeoxyribonuclease_I. 1 hit.
SUPFAM	SSF53098. RNaseH_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B7UZ93_PSEA8

Accession

Primary (citable) accession number: B7UZ93

Entry history

Integrated into UniProtKB/TrEMBL:	February 10, 2009
Last sequence update:	February 10, 2009
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)