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B7UV17 (B7UV17_PSEA8) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:idh EMBL CAW27207.1
Ordered Locus Names:PLES_24811 EMBL CAW27207.1
OrganismPseudomonas aeruginosa (strain LESB58) [Complete proteome] [HAMAP] EMBL CAW27207.1
Taxonomic identifier557722 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length741 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region133 – 1408Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3501Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5481Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5521Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1461Substrate By similarity PIRSR PIRSR009407-2
Binding site5471Substrate By similarity PIRSR PIRSR009407-2
Site2551Critical for catalysis By similarity
Site4201Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
B7UV17 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 64877E2476BBA6F6

FASTA74181,594
        10         20         30         40         50         60 
MSIRSKITYT FTDEAPALAT YSLLPIVKAF AASAGIDVET SDISLAGRIL ANFADRLEAD 

        70         80         90        100        110        120 
QRIEDDLARL AALATSPDAN IIKLPNISAS VPQLKGAIAE LQGLGYKVPD FPEDPQTDEE 

       130        140        150        160        170        180 
KEVRARYAKI LGSAVNPVLR EGNSDRRAPA AVKAYARKHP HSMGKWSMAS RSHADYMRGG 

       190        200        210        220        230        240 
DFFSSEQSIT MAKAGDVRIE FVGKDGKVEV KKQLSLQEGE VLDSMFMSCG KLRDFFEKTL 

       250        260        270        280        290        300 
QDCKETGVMW SLHVKATMMK ISHPIVFGHA VSVYYKDVFD KWGQLFEELG VNPNNGISSV 

       310        320        330        340        350        360 
YDKIKSLPAS QQEEILHDIH EVYSHRPEMA MVDSVKGITN LHIPSDVIVD ASMPAMIRNS 

       370        380        390        400        410        420 
GQMWGKDGKQ KDTKAVMPES TYARIYQEMI NFCKTNGAFD PTTMGSVPNV GLMAQKAEEY 

       430        440        450        460        470        480 
GSHDKTFEMT ADGTMRVVLA DGSVLMQHDV ETGDIWRACQ TKDAPIRDWV KLAVTRARQS 

       490        500        510        520        530        540 
DTPAIFWLDP ERAHDRELRK KVELYLKDHD LTGLDISIMG YNEAIRVSME RLIRGKDTIS 

       550        560        570        580        590        600 
VTGNVLRDYL TDLFPIMELG TSAKMLSIVP LMAGGGMYET GAGGSAPKHV QQLVEENYLR 

       610        620        630        640        650        660 
WDSLGEFLAL AVSLEETGIK TGNAKAKLLG KALDEATGKL LDNNKSPSRK VGDIDNRGSH 

       670        680        690        700        710        720 
FYLAMYWAQA LAAQDEDAEL KAHFAPLAKA LTEQEATIVA ELNAVQGKPA EIGGYYRSNP 

       730        740 
ELTSKVMRPS ATFNAAIDSL A 

« Hide

References

[1]"Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool epidemic strain of Pseudomonas aeruginosa."
Winstanley C., Langille M.G.I., Fothergill J.L., Kukavica-Ibrulj I., Paradis-Bleau C., Sanschagrin F., Thomson N.R., Winsor G.L., Quail M.A., Lennard N., Bignell A., Clarke L., Seeger K., Saunders D., Harris D., Parkhill J., Hancock R.E.W., Brinkman F.S.L., Levesque R.C.
Genome Res. 19:12-23(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LESB58 EMBL CAW27207.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM209186 Genomic DNA. Translation: CAW27207.1.
RefSeqYP_002440081.1. NC_011770.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING557722.PLES_24811.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAW27207; CAW27207; PLES_24811.
GeneID7176975.
KEGGpag:PLES_24811.
PATRIC19814663. VBIPseAer113719_2571.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2838.
HOGENOMHOG000240860.
KOK00031.
OMASIVKLMQ.
OrthoDBEOG6DVJPP.

Enzyme and pathway databases

BioCycPAER557722:GHJW-2517-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7UV17_PSEA8
AccessionPrimary (citable) accession number: B7UV17
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: July 9, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)