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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciECOL574521:GJAO-3964-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
Ordered Locus Names:E2348C_3823Imported
OrganismiEscherichia coli O127:H6 (strain E2348/69 / EPEC)Imported
Taxonomic identifieri574521 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000008205 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi574521.E2348C_3823.

Structurei

3D structure databases

ProteinModelPortaliB7ULD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

B7ULD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLAVCFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT
60 70 80 90 100
LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGEY TLQLDTRSGT
110 120 130 140 150
PTLMISIQNA VEPVASLVRE CPKWDGLPLT LDVSATFPEG VAVRDYYSQQ
160 170 180 190 200
IAIVKNGQIT LQPAASSNGL LLLERAETDA SAPFDWHNAT VHFVLTDRFE
210 220 230 240 250
NGDPNNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA
260 270 280 290 300
PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGSK ADLRTLVDSA
310 320 330 340 350
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDELK KTLGERWSDW
360 370 380 390 400
KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS
410 420 430 440 450
LAFLPDIKTE STSASGLPVF YKNKTDTHAK DIDGFTPRDY LTHWLSQWVR
460 470 480 490 500
DYGIDGFRVD TAKHVELPTW QQLKTEASAA LREWKKANPD KALDDKPFWM
510 520 530 540 550
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ MDTTWQQMAE
560 570 580 590 600
KLQDFNVLSY LSSHDTRLFR EGGHKAAELL LLAPGAVQIF YGDESSRPFG
610 620 630 640 650
PTGSDPLQGT RSDMNWQDVS GKSAASVAHW QKISQFRARH PAIGAGKQTT
660 670
LSLKQGYGFV REHGDDKVLV IWAGQQ
Length:676
Mass (Da):75,820
Last modified:February 10, 2009 - v1
Checksum:i4BCB26FCB969272A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM180568 Genomic DNA. Translation: CAS11371.1.
RefSeqiWP_000762038.1. NC_011601.1.

Genome annotation databases

EnsemblBacteriaiCAS11371; CAS11371; E2348C_3823.
KEGGiecg:E2348C_3823.
PATRICi18346852. VBIEscCol90278_3910.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM180568 Genomic DNA. Translation: CAS11371.1.
RefSeqiWP_000762038.1. NC_011601.1.

3D structure databases

ProteinModelPortaliB7ULD2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi574521.E2348C_3823.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAS11371; CAS11371; E2348C_3823.
KEGGiecg:E2348C_3823.
PATRICi18346852. VBIEscCol90278_3910.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciECOL574521:GJAO-3964-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69."
    Iguchi A., Thomson N.R., Ogura Y., Saunders D., Ooka T., Henderson I.R., Harris D., Asadulghani M., Kurokawa K., Dean P., Kenny B., Quail M.A., Thurston S., Dougan G., Hayashi T., Parkhill J., Frankel G.
    J. Bacteriol. 191:347-354(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: E2348/69 / EPECImported.

Entry informationi

Entry nameiB7ULD2_ECO27
AccessioniPrimary (citable) accession number: B7ULD2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 27, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.