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B7UJ18 (B7UJ18_ECO27) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:tdcE EMBL CAS10952.1
Ordered Locus Names:E2348C_3404 EMBL CAS10952.1
OrganismEscherichia coli O127:H6 (strain E2348/69 / EPEC) [Complete proteome] [HAMAP] EMBL CAS10952.1
Taxonomic identifier574521 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length764 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Contains glycine radical domain. SAAS SAAS001150

Ontologies

Keywords
   LigandPyruvate EMBL CAS10952.1
   Molecular functionLyase EMBL CAS10952.1
   PTMOrganic radical PIRSR PIRSR000379-2
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionformate C-acetyltransferase activity

Inferred from electronic annotation. Source: InterPro

lyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site4231S-acetylcysteine intermediate By similarity PIRSR PIRSR000379-1
Active site4241Cysteine radical intermediate By similarity PIRSR PIRSR000379-1

Amino acid modifications

Modified residue7391Glycine radical By similarity PIRSR PIRSR000379-2

Sequences

Sequence LengthMass (Da)Tools
B7UJ18 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 34BA82D5865CBFB6

FASTA76485,986
        10         20         30         40         50         60 
MKVDIDTSDK LYADAWLGFK GTDWKNEINV RDFIQHNYTP YEGDESFLAE ATPATTELWE 

        70         80         90        100        110        120 
KVMEGIRIEN ATHAPLDFDT NIATTITAHD AGYIDQPLEK IVGLQTDAPL KRALHPFGGI 

       130        140        150        160        170        180 
NMIRSSFHAY GREMDSEFEY IFTDLRKTHN QGVFDVYSPD MLRCRKSGVL TGLPDGYGRG 

       190        200        210        220        230        240 
RIIGDYRRVA LYGISYLVRE RELQFADLQS RLEKGEDLEA TIRLREELAE HRRALLQIQE 

       250        260        270        280        290        300 
MAAKYGFDIS RPAQNAQEAV QWIYFAYLAA VKSQNGGAMS LGRTASFLDI YIERDFKAGV 

       310        320        330        340        350        360 
LNEQQAQELI DHFIMKIRMV RFLRTPEFDS LFSGDPIWAT EVIGGMGLDG RTLVTKNSFR 

       370        380        390        400        410        420 
YLHTLHTMGP APEPNLTILW SEALPIAFKK YAAQVSIVTS SLQYENDDLM RTDFNSDDYA 

       430        440        450        460        470        480 
IACCVSPMVI GKQMQFFGAR ANLAKTLLYA INGGMDEKLK IQVGPKTAPL MDDVLDYDKV 

       490        500        510        520        530        540 
MDSLDHFMDW LAVQYISALN IIHYMHDKYS YEASLMALHD RDVYRTMACG IAGLSVATDS 

       550        560        570        580        590        600 
LSAIKYARVK PIRDENGLAV DFEIDGEYPQ YGNNDERVDS IACDLVERFM KKIKALPTYR 

       610        620        630        640        650        660 
NAVPTQSILT ITSNVVYGQK TGNTPDGRRA GTPFAPGANP MHGRDRKGAV ASLTSVAKLP 

       670        680        690        700        710        720 
FTYAKDGISY TFSIVPAALG KEDPIRKTNL VGLLDGYFHH EADVEGGQHL NVNVMNREML 

       730        740        750        760 
LDAIEHPEKY PNLTIRVSGY AVRFNALTRE QQQDVISRTF TQAL 

« Hide

References

[1]"Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69."
Iguchi A., Thomson N.R., Ogura Y., Saunders D., Ooka T., Henderson I.R., Harris D., Asadulghani M., Kurokawa K., Dean P., Kenny B., Quail M.A., Thurston S., Dougan G., Hayashi T., Parkhill J., Frankel G.
J. Bacteriol. 191:347-354(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: E2348/69 / EPEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM180568 Genomic DNA. Translation: CAS10952.1.
RefSeqYP_002330872.1. NC_011601.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING574521.E2348C_3404.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAS10952; CAS10952; E2348C_3404.
GeneID7061770.
KEGGecg:E2348C_3404.
PATRIC18345968. VBIEscCol90278_3475.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1882.
HOGENOMHOG000011346.
KOK00656.
OMAFDAYGRE.
OrthoDBEOG6Q8J0J.

Enzyme and pathway databases

BioCycECOL574521:GJAO-3527-MONOMER.

Family and domain databases

InterProIPR005949. Form_AcTrfase.
IPR019777. Form_AcTrfase_GR_CS.
IPR001150. Gly_radical.
IPR004184. PFL_dom.
[Graphical view]
PfamPF01228. Gly_radical. 1 hit.
PF02901. PFL. 1 hit.
[Graphical view]
PIRSFPIRSF000379. For_Ac_trans_1. 1 hit.
TIGRFAMsTIGR01255. pyr_form_ly_1. 1 hit.
PROSITEPS00850. GLY_RADICAL_1. 1 hit.
PS51149. GLY_RADICAL_2. 1 hit.
PS51554. PFL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7UJ18_ECO27
AccessionPrimary (citable) accession number: B7UJ18
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)