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B7R3T4 (B7R3T4_9EURY) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:TAM4_1203 EMBL EEB73455.2
OrganismThermococcus sp. AM4 [Complete proteome] EMBL EEB73455.2
Taxonomic identifier246969 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B7R3T4 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: EE9CBCD83E24FD57

FASTA47554,424
        10         20         30         40         50         60 
MGFAPHHTGG RDMRRSARVL VLIIAFFLLA GVYYPSTSAA KYSELEQGGV IMQAFYWDVP 

        70         80         90        100        110        120 
EGGIWWDTIR QKIPEWYDAG ISAIWIPPAS KGMGGAYSMG YDPYDYFDLG EFYQKGTVET 

       130        140        150        160        170        180 
RFGSKEELVN MISTAHQYGI KVIADIVINH RAGGDLEWNP YVGDYTWTDF SKVASGKYKA 

       190        200        210        220        230        240 
HYMDFHPNNY STSDEGTFGG FPDIDHLVPF NQYWLWASNE SYAAYLRSIG IDAWRFDYVK 

       250        260        270        280        290        300 
GYGAWVVKDW LSQWGGWAVG EYWDTNVDAL LNWAYSSGAK VFDFPLYYKM DEAFDNKNIP 

       310        320        330        340        350        360 
ALVYAIQNGE TVVSRDPFKA VTFVANHDTN IIWNKYPAYA FILTYEGQPV IFYRDYEEWL 

       370        380        390        400        410        420 
NKDKLNNLIW IHEHLAGGST KILYYDDDEL IFMREGYGDR PGLITYINLG SDWAERWVNV 

       430        440        450        460        470 
GSKFAGYTIH EYTGNLGGWV DRYVQYDGWV KLTAPPHDPA NGYYGYSVWS YAGVG 

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References

[1]Bartlett D., Bonch-Osmolovskaya E., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AM4 EMBL EEB73455.2.
[2]"Complete Genome Sequence of the Hyperthermophilic Archaeon Thermococcus sp. Strain AM4, Capable of Organotrophic Growth and Growth at the Expense of Hydrogenogenic or Sulfidogenic Oxidation of Carbon Monoxide."
Oger P., Sokolova T.G., Kozhevnikova D.A., Chernyh N.A., Bartlett D.H., Bonch-Osmolovskaya E.A., Lebedinsky A.V.
J. Bacteriol. 193:7019-7020(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AM4 EMBL EEB73455.2.
[3]Oger P.M., Solokova T.G., Kozhevnikova D.A., Chernyh N.A., Bartlett D.H., Bonch-Osmoloskaya E.A., Lebedinsky A.V.
Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AM4 EMBL EEB73455.2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002952 Genomic DNA. Translation: EEB73455.2.
RefSeqYP_002581903.2. NC_016051.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEEB73455; EEB73455; TAM4_1203.
GeneID7419979.
KEGGtha:TAM4_1203.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycTSP246969:GJBA-1778-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7R3T4_9EURY
AccessionPrimary (citable) accession number: B7R3T4
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: November 16, 2011
Last modified: January 22, 2014
This is version 30 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)