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Protein
Submitted name:

Alpha-amylase

Gene

TAM4_1203

Organism
Thermococcus sp. AM4
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTSP246969:GJBA-1778-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
ORF Names:TAM4_1203Imported
OrganismiThermococcus sp. AM4Imported
Taxonomic identifieri246969 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
ProteomesiUP000009277 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B7R3T4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGFAPHHTGG RDMRRSARVL VLIIAFFLLA GVYYPSTSAA KYSELEQGGV
60 70 80 90 100
IMQAFYWDVP EGGIWWDTIR QKIPEWYDAG ISAIWIPPAS KGMGGAYSMG
110 120 130 140 150
YDPYDYFDLG EFYQKGTVET RFGSKEELVN MISTAHQYGI KVIADIVINH
160 170 180 190 200
RAGGDLEWNP YVGDYTWTDF SKVASGKYKA HYMDFHPNNY STSDEGTFGG
210 220 230 240 250
FPDIDHLVPF NQYWLWASNE SYAAYLRSIG IDAWRFDYVK GYGAWVVKDW
260 270 280 290 300
LSQWGGWAVG EYWDTNVDAL LNWAYSSGAK VFDFPLYYKM DEAFDNKNIP
310 320 330 340 350
ALVYAIQNGE TVVSRDPFKA VTFVANHDTN IIWNKYPAYA FILTYEGQPV
360 370 380 390 400
IFYRDYEEWL NKDKLNNLIW IHEHLAGGST KILYYDDDEL IFMREGYGDR
410 420 430 440 450
PGLITYINLG SDWAERWVNV GSKFAGYTIH EYTGNLGGWV DRYVQYDGWV
460 470
KLTAPPHDPA NGYYGYSVWS YAGVG
Length:475
Mass (Da):54,424
Last modified:November 15, 2011 - v2
Checksum:iEE9CBCD83E24FD57
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002952 Genomic DNA. Translation: EEB73455.2.
RefSeqiWP_014122911.1. NC_016051.1.
YP_002581903.2. NC_016051.1.

Genome annotation databases

EnsemblBacteriaiEEB73455; EEB73455; TAM4_1203.
GeneIDi7419979.
KEGGitha:TAM4_1203.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002952 Genomic DNA. Translation: EEB73455.2.
RefSeqiWP_014122911.1. NC_016051.1.
YP_002581903.2. NC_016051.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEEB73455; EEB73455; TAM4_1203.
GeneIDi7419979.
KEGGitha:TAM4_1203.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciTSP246969:GJBA-1778-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Hyperthermophilic Archaeon Thermococcus sp. Strain AM4, Capable of Organotrophic Growth and Growth at the Expense of Hydrogenogenic or Sulfidogenic Oxidation of Carbon Monoxide."
    Oger P., Sokolova T.G., Kozhevnikova D.A., Chernyh N.A., Bartlett D.H., Bonch-Osmolovskaya E.A., Lebedinsky A.V.
    J. Bacteriol. 193:7019-7020(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AM4Imported.

Entry informationi

Entry nameiB7R3T4_9EURY
AccessioniPrimary (citable) accession number: B7R3T4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2009
Last sequence update: November 15, 2011
Last modified: January 6, 2015
This is version 33 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.