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B7R2S2 (B7R2S2_9EURY) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:TAM4_12 EMBL EEB73724.1
OrganismThermococcus sp. AM4 [Complete proteome] EMBL EEB73724.1
Taxonomic identifier246969 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B7R2S2 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 9BF25CF5C88B2132

FASTA38044,095
        10         20         30         40         50         60 
MVGSTFRNLL LKLGLPEERL EILEGKGGLM EDEFEGIRYL RFRDSARGFR RGTVVFEDGT 

        70         80         90        100        110        120 
VVAGFPHIKR IVQLENGIRR VFKGRPFYVE EKVDGYNVRV VKVRGRILAL TRGGFVCPFT 

       130        140        150        160        170        180 
TERILDFVNE EFFRDYPNLI LVGEMAGPES PYLVEGPPYV KEDIKFFLFD VQEKGTGRSV 

       190        200        210        220        230        240 
PVEERLKLAE EYGIDHVEVF GLYDRSRMDE LYDLIERLSG EGREGIVMKT PDMRRIAKYV 

       250        260        270        280        290        300 
TPYANINDIR IGSHIFFDLP HGYFMQRIKR LAFYLAEKRI RGEEFDEYAK ALGRALLQPF 

       310        320        330        340        350        360 
VESIHEVAGG GEVEETFRVR VKNVSTAHRM VTHFERLGVK IHIEDIEDLG NGYWRITFKR 

       370        380 
VYPDATREIR ELWNGLAFVD 

« Hide

References

[1]Bartlett D., Bonch-Osmolovskaya E., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AM4 EMBL EEB73724.1.
[2]"Complete Genome Sequence of the Hyperthermophilic Archaeon Thermococcus sp. Strain AM4, Capable of Organotrophic Growth and Growth at the Expense of Hydrogenogenic or Sulfidogenic Oxidation of Carbon Monoxide."
Oger P., Sokolova T.G., Kozhevnikova D.A., Chernyh N.A., Bartlett D.H., Bonch-Osmolovskaya E.A., Lebedinsky A.V.
J. Bacteriol. 193:7019-7020(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AM4 EMBL EEB73724.1.
[3]Oger P.M., Solokova T.G., Kozhevnikova D.A., Chernyh N.A., Bartlett D.H., Bonch-Osmoloskaya E.A., Lebedinsky A.V.
Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AM4 EMBL EEB73724.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002952 Genomic DNA. Translation: EEB73724.1.
RefSeqYP_002582253.1. NC_016051.1.

3D structure databases

ProteinModelPortalB7R2S2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEEB73724; EEB73724; TAM4_12.
GeneID7419562.
KEGGtha:TAM4_12.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7R2S2_9EURY
AccessionPrimary (citable) accession number: B7R2S2
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)