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Protein
Submitted name:

Uncharacterized protein

Gene

TAM4_12

Organism
Thermococcus sp. AM4
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:TAM4_12Imported
OrganismiThermococcus sp. AM4Imported
Taxonomic identifieri246969 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
ProteomesiUP000009277 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliB7R2S2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK07468.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

B7R2S2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGSTFRNLL LKLGLPEERL EILEGKGGLM EDEFEGIRYL RFRDSARGFR
60 70 80 90 100
RGTVVFEDGT VVAGFPHIKR IVQLENGIRR VFKGRPFYVE EKVDGYNVRV
110 120 130 140 150
VKVRGRILAL TRGGFVCPFT TERILDFVNE EFFRDYPNLI LVGEMAGPES
160 170 180 190 200
PYLVEGPPYV KEDIKFFLFD VQEKGTGRSV PVEERLKLAE EYGIDHVEVF
210 220 230 240 250
GLYDRSRMDE LYDLIERLSG EGREGIVMKT PDMRRIAKYV TPYANINDIR
260 270 280 290 300
IGSHIFFDLP HGYFMQRIKR LAFYLAEKRI RGEEFDEYAK ALGRALLQPF
310 320 330 340 350
VESIHEVAGG GEVEETFRVR VKNVSTAHRM VTHFERLGVK IHIEDIEDLG
360 370 380
NGYWRITFKR VYPDATREIR ELWNGLAFVD
Length:380
Mass (Da):44,095
Last modified:February 10, 2009 - v1
Checksum:i9BF25CF5C88B2132
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002952 Genomic DNA. Translation: EEB73724.1.
RefSeqiWP_014122547.1. NC_016051.1.
YP_002582253.1. NC_016051.1.

Genome annotation databases

EnsemblBacteriaiEEB73724; EEB73724; TAM4_12.
GeneIDi7419562.
KEGGitha:TAM4_12.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002952 Genomic DNA. Translation: EEB73724.1.
RefSeqiWP_014122547.1. NC_016051.1.
YP_002582253.1. NC_016051.1.

3D structure databases

ProteinModelPortaliB7R2S2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEEB73724; EEB73724; TAM4_12.
GeneIDi7419562.
KEGGitha:TAM4_12.

Phylogenomic databases

KOiK07468.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Hyperthermophilic Archaeon Thermococcus sp. Strain AM4, Capable of Organotrophic Growth and Growth at the Expense of Hydrogenogenic or Sulfidogenic Oxidation of Carbon Monoxide."
    Oger P., Sokolova T.G., Kozhevnikova D.A., Chernyh N.A., Bartlett D.H., Bonch-Osmolovskaya E.A., Lebedinsky A.V.
    J. Bacteriol. 193:7019-7020(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AM4Imported.

Entry informationi

Entry nameiB7R2S2_9EURY
AccessioniPrimary (citable) accession number: B7R2S2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: January 7, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.